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Cluster: HRGMv2_0130_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0130_1 HRGMv2_0130_1_59 76315 77769 + CE19
pfam HRGMv2_0130_1 HRGMv2_0130_1_60 77772 78947 + DUF4861
CAZyme HRGMv2_0130_1 HRGMv2_0130_1_61 79067 80734 + GH28
CAZyme HRGMv2_0130_1 HRGMv2_0130_1_62 80746 82872 + PL1_2
CAZyme HRGMv2_0130_1 HRGMv2_0130_1_63 82946 84634 + CE12 | CE8
TF HRGMv2_0130_1 HRGMv2_0130_1_64 84775 89154 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_0130_1 HRGMv2_0130_1_65 89151 90362 + GH105
TC HRGMv2_0130_1 HRGMv2_0130_1_66 90597 93833 + 1.B.14.6.1
TC HRGMv2_0130_1 HRGMv2_0130_1_67 93862 95751 + 8.A.46.1.3
Gene ID: HRGMv2_0130_1_59
Type: CAZyme
Location: 76315 - 77769 (+)
Gene ID: HRGMv2_0130_1_60
Type: pfam
Location: 77772 - 78947 (+)
Gene ID: HRGMv2_0130_1_61
Type: CAZyme
Location: 79067 - 80734 (+)
Gene ID: HRGMv2_0130_1_62
Type: CAZyme
Location: 80746 - 82872 (+)
Gene ID: HRGMv2_0130_1_63
Type: CAZyme
Location: 82946 - 84634 (+)
Gene ID: HRGMv2_0130_1_64
Type: TF
Location: 84775 - 89154 (+)
Gene ID: HRGMv2_0130_1_65
Type: CAZyme
Location: 89151 - 90362 (+)
Gene ID: HRGMv2_0130_1_66
Type: TC
Location: 90597 - 93833 (+)
Gene ID: HRGMv2_0130_1_67
Type: TC
Location: 93862 - 95751 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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