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Cluster: CGMR054096_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_256433 k141_256433_18 16469 18094 - 8.A.46.1.3
TC k141_256433 k141_256433_19 18109 21309 - 1.B.14.6.1
CAZyme k141_256433 k141_256433_20 21557 23302 - GH20
sulfatase k141_256433 k141_256433_21 23295 24119 - S1_7
pfam k141_256433 k141_256433_22 24127 25134 - Metallophos
CAZyme k141_256433 k141_256433_23 25151 26755 - GH63
pfam k141_256433 k141_256433_24 26774 28696 - Alk_phosphatase
pfam k141_256433 k141_256433_25 28705 29571 - Exo_endo_phos
CAZyme k141_256433 k141_256433_26 29604 32495 - GH92
Gene ID: k141_256433_18
Type: TC
Location: 16469 - 18094 (-)
Gene ID: k141_256433_19
Type: TC
Location: 18109 - 21309 (-)
Gene ID: k141_256433_20
Type: CAZyme
Location: 21557 - 23302 (-)
Gene ID: k141_256433_21
Type: sulfatase
Location: 23295 - 24119 (-)
Gene ID: k141_256433_22
Type: pfam
Location: 24127 - 25134 (-)
Gene ID: k141_256433_23
Type: CAZyme
Location: 25151 - 26755 (-)
Gene ID: k141_256433_24
Type: pfam
Location: 26774 - 28696 (-)
Gene ID: k141_256433_25
Type: pfam
Location: 28705 - 29571 (-)
Gene ID: k141_256433_26
Type: CAZyme
Location: 29604 - 32495 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_256433_18 vegan > omnivore 1.51681 0.00364

🧭 Explore Read Mapping of CGC

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