Cluster: CGMR054096_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate: pectin/host glycan
- Genome ID: CGMR054096
- CGC Family ID: CGCFAM_00110
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_239154 | k141_239154_50 | 68668 | 71883 | + | 1.B.14.6.1 |
| pfam | k141_239154 | k141_239154_51 | 71902 | 73734 | + | SusD_RagB | SusD-like_2 | SusD-like_3 |
| CAZyme | k141_239154 | k141_239154_52 | 73754 | 75664 | + | GH16_3 |
| sulfatase | k141_239154 | k141_239154_53 | 75900 | 77486 | + | S1_11 |
| CAZyme | k141_239154 | k141_239154_54 | 77483 | 79795 | + | GH20 |
| CAZyme | k141_239154 | k141_239154_55 | 79817 | 82876 | + | GH2 |
| CAZyme | k141_239154 | k141_239154_56 | 82873 | 85584 | + | GH16_3 | GH29 |
Gene ID: k141_239154_50
Type: TC
Location: 68668 - 71883 (+)
Type: TC
Location: 68668 - 71883 (+)
Gene ID: k141_239154_51
Type: pfam
Location: 71902 - 73734 (+)
Type: pfam
Location: 71902 - 73734 (+)
Gene ID: k141_239154_52
Type: CAZyme
Location: 73754 - 75664 (+)
Type: CAZyme
Location: 73754 - 75664 (+)
Gene ID: k141_239154_53
Type: sulfatase
Location: 75900 - 77486 (+)
Type: sulfatase
Location: 75900 - 77486 (+)
Gene ID: k141_239154_54
Type: CAZyme
Location: 77483 - 79795 (+)
Type: CAZyme
Location: 77483 - 79795 (+)
Gene ID: k141_239154_55
Type: CAZyme
Location: 79817 - 82876 (+)
Type: CAZyme
Location: 79817 - 82876 (+)
Gene ID: k141_239154_56
Type: CAZyme
Location: 82873 - 85584 (+)
Type: CAZyme
Location: 82873 - 85584 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp944321195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.