Cluster: CGMR054096_CGC26
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR054096
- CGC Family ID: CGCFAM_04754
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_256433 | k141_256433_84 | 111460 | 114597 | + | 1.B.14.6.1 |
| TC | k141_256433 | k141_256433_85 | 114611 | 116173 | + | 8.A.46.1.3 |
| pfam | k141_256433 | k141_256433_86 | 116194 | 116610 | + | DUF5017 |
| CAZyme | k141_256433 | k141_256433_87 | 116631 | 118616 | + | GH33 |
| CAZyme | k141_256433 | k141_256433_88 | 118616 | 119770 | + | GH33 |
| pfam | k141_256433 | k141_256433_89 | 119767 | 120975 | + | BNR_2 |
| CAZyme | k141_256433 | k141_256433_90 | 120972 | 122390 | + | CE20 |
Gene ID: k141_256433_84
Type: TC
Location: 111460 - 114597 (+)
Type: TC
Location: 111460 - 114597 (+)
Gene ID: k141_256433_85
Type: TC
Location: 114611 - 116173 (+)
Type: TC
Location: 114611 - 116173 (+)
Gene ID: k141_256433_86
Type: pfam
Location: 116194 - 116610 (+)
Type: pfam
Location: 116194 - 116610 (+)
Gene ID: k141_256433_87
Type: CAZyme
Location: 116631 - 118616 (+)
Type: CAZyme
Location: 116631 - 118616 (+)
Gene ID: k141_256433_88
Type: CAZyme
Location: 118616 - 119770 (+)
Type: CAZyme
Location: 118616 - 119770 (+)
Gene ID: k141_256433_89
Type: pfam
Location: 119767 - 120975 (+)
Type: pfam
Location: 119767 - 120975 (+)
Gene ID: k141_256433_90
Type: CAZyme
Location: 120972 - 122390 (+)
Type: CAZyme
Location: 120972 - 122390 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp944321195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.