Genome Details
Selected Rep_genome_ID: CGMR013258
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp000434275
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR013258 | 2,879,916 | 91.66% | 4.8% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR013258_CGC5 | CGCFAM_00002 | Yes | 5 | 4 | |
| CGMR013258_CGC17 | CGCFAM_00047 | Yes | 5 | 1 | |
| CGMR013258_CGC9 | CGCFAM_00117 | Yes | 4 | 1 | alpha-glucan |
| CGMR013258_CGC19 | CGCFAM_00270 | Yes | 13 | 1 | |
| CGMR013258_CGC8 | CGCFAM_00334 | Yes | 5 | 2 | |
| CGMR013258_CGC16 | CGCFAM_00457 | Yes | 6 | 2 | |
| CGMR013258_CGC10 | CGCFAM_00500 | Yes | 5 | 2 | |
| CGMR013258_CGC2 | CGCFAM_00566 | Yes | 3 | 1 | |
| CGMR013258_CGC18 | CGCFAM_01550 | Yes | 10 | 5 | |
| CGMR013258_CGC3 | CGCFAM_04543 | Yes | 3 | 1 | |
| CGMR013258_CGC7 | CGCFAM_04661 | Yes | 5 | 2 | |
| CGMR013258_CGC21 | CGCFAM_05408 | Yes | 4 | 1 | |
| CGMR013258_CGC4 | CGCFAM_05409 | Yes | 6 | 1 | |
| CGMR013258_CGC15 | CGCFAM_06437 | Yes | 3 | 1 |
Top CAZyme Families