Cluster: CGMR013258_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR013258
- CGC Family ID: CGCFAM_04661
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_265561 | k141_265561_16 | 14722 | 16635 | + | GH13_14 |
| TC | k141_265561 | k141_265561_17 | 16632 | 17891 | - | 2.A.49.9.2 |
| CAZyme | k141_265561 | k141_265561_18 | 18061 | 19620 | + | GH77 |
| pfam | k141_265561 | k141_265561_19 | 19685 | 21202 | + | SpoIVA_ATPase | SpoIVA_middle | SpoIVA_C |
| TC | k141_265561 | k141_265561_20 | 21340 | 23097 | + | 3.A.1.120.6 |
Gene ID: k141_265561_16
Type: CAZyme
Location: 14722 - 16635 (+)
Type: CAZyme
Location: 14722 - 16635 (+)
Gene ID: k141_265561_17
Type: TC
Location: 16632 - 17891 (-)
Type: TC
Location: 16632 - 17891 (-)
Gene ID: k141_265561_18
Type: CAZyme
Location: 18061 - 19620 (+)
Type: CAZyme
Location: 18061 - 19620 (+)
Gene ID: k141_265561_19
Type: pfam
Location: 19685 - 21202 (+)
Type: pfam
Location: 19685 - 21202 (+)
Gene ID: k141_265561_20
Type: TC
Location: 21340 - 23097 (+)
Type: TC
Location: 21340 - 23097 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp000434275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.