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Cluster: CGMR013258_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_358509 k141_358509_37 37302 39554 + GT35
CAZyme k141_358509 k141_358509_38 39744 42155 + GH94
CAZyme k141_358509 k141_358509_39 42191 44887 + GH94
TF k141_358509 k141_358509_40 44888 45625 - HTH_AraC | HTH_AraC
NULL(UNKNOWN) k141_358509 k141_358509_41 45774 47144 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_358509 k141_358509_42 47334 48248 + 3.A.1.1.4
TC k141_358509 k141_358509_43 48254 49117 + 3.A.1.1.36
CAZyme k141_358509 k141_358509_44 49148 52624 + CBM4 | CBM4 | CBM4 | CBM4 | GH16_3
CAZyme k141_358509 k141_358509_45 52753 53994 + CBM13 | CBM13 | GH16_21
TC k141_358509 k141_358509_46 54151 56049 + 9.B.34.1.3
Gene ID: k141_358509_37
Type: CAZyme
Location: 37302 - 39554 (+)
Gene ID: k141_358509_38
Type: CAZyme
Location: 39744 - 42155 (+)
Gene ID: k141_358509_39
Type: CAZyme
Location: 42191 - 44887 (+)
Gene ID: k141_358509_40
Type: TF
Location: 44888 - 45625 (-)
Gene ID: k141_358509_41
Type:
Location: 45774 - 47144 (+)
Gene ID: k141_358509_42
Type: TC
Location: 47334 - 48248 (+)
Gene ID: k141_358509_43
Type: TC
Location: 48254 - 49117 (+)
Gene ID: k141_358509_44
Type: CAZyme
Location: 49148 - 52624 (+)
Gene ID: k141_358509_45
Type: CAZyme
Location: 52753 - 53994 (+)
Gene ID: k141_358509_46
Type: TC
Location: 54151 - 56049 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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