Cluster: CGMR013258_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR013258
- CGC Family ID: CGCFAM_00457
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_110256 | k141_110256_43 | 42833 | 43789 | + | GT2 |
| NULL(UNKNOWN) | k141_110256 | k141_110256_44 | 43808 | 44026 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_110256 | k141_110256_45 | 44142 | 44369 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_110256 | k141_110256_46 | 44477 | 46225 | + | GH73 |
| pfam | k141_110256 | k141_110256_47 | 46329 | 48149 | + | Cadherin-like |
| TC | k141_110256 | k141_110256_48 | 48162 | 50600 | + | 3.A.9.1.2 |
Gene ID: k141_110256_43
Type: CAZyme
Location: 42833 - 43789 (+)
Type: CAZyme
Location: 42833 - 43789 (+)
Gene ID: k141_110256_44
Type:
Location: 43808 - 44026 (+)
Type:
Location: 43808 - 44026 (+)
Gene ID: k141_110256_45
Type:
Location: 44142 - 44369 (+)
Type:
Location: 44142 - 44369 (+)
Gene ID: k141_110256_46
Type: CAZyme
Location: 44477 - 46225 (+)
Type: CAZyme
Location: 44477 - 46225 (+)
Gene ID: k141_110256_47
Type: pfam
Location: 46329 - 48149 (+)
Type: pfam
Location: 46329 - 48149 (+)
Gene ID: k141_110256_48
Type: TC
Location: 48162 - 50600 (+)
Type: TC
Location: 48162 - 50600 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp000434275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.