Cluster: CGMR013258_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR013258
- CGC Family ID: CGCFAM_00334
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_244988 | k141_244988_12 | 7334 | 8698 | - | 2.A.2.3.3 |
| CAZyme | k141_244988 | k141_244988_13 | 8926 | 11961 | - | GH2 |
| TF | k141_244988 | k141_244988_14 | 12087 | 12944 | + | HTH_AraC | HTH_AraC |
| pfam | k141_244988 | k141_244988_15 | 13087 | 14034 | - | Bgal_small_N |
| CAZyme | k141_244988 | k141_244988_16 | 14018 | 15406 | - | GH2 |
Gene ID: k141_244988_12
Type: TC
Location: 7334 - 8698 (-)
Type: TC
Location: 7334 - 8698 (-)
Gene ID: k141_244988_13
Type: CAZyme
Location: 8926 - 11961 (-)
Type: CAZyme
Location: 8926 - 11961 (-)
Gene ID: k141_244988_14
Type: TF
Location: 12087 - 12944 (+)
Type: TF
Location: 12087 - 12944 (+)
Gene ID: k141_244988_15
Type: pfam
Location: 13087 - 14034 (-)
Type: pfam
Location: 13087 - 14034 (-)
Gene ID: k141_244988_16
Type: CAZyme
Location: 14018 - 15406 (-)
Type: CAZyme
Location: 14018 - 15406 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp000434275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_244988_14 | vegetarian > vegan | 1.07994 | 0.02258 |