Cluster: CGMR013258_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR013258
- CGC Family ID: CGCFAM_00500
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_348338 | k141_348338_9 | 8906 | 11029 | + | GH25 |
| pfam | k141_348338 | k141_348338_10 | 11053 | 12348 | + | Amidase_3 |
| CAZyme | k141_348338 | k141_348338_11 | 12738 | 13439 | + | GT26 |
| pfam | k141_348338 | k141_348338_12 | 13615 | 14703 | + | HTH_30 | GGDEF_2 |
| TC | k141_348338 | k141_348338_13 | 14715 | 15401 | + | 3.A.1.140.1 |
Gene ID: k141_348338_9
Type: CAZyme
Location: 8906 - 11029 (+)
Type: CAZyme
Location: 8906 - 11029 (+)
Gene ID: k141_348338_10
Type: pfam
Location: 11053 - 12348 (+)
Type: pfam
Location: 11053 - 12348 (+)
Gene ID: k141_348338_11
Type: CAZyme
Location: 12738 - 13439 (+)
Type: CAZyme
Location: 12738 - 13439 (+)
Gene ID: k141_348338_12
Type: pfam
Location: 13615 - 14703 (+)
Type: pfam
Location: 13615 - 14703 (+)
Gene ID: k141_348338_13
Type: TC
Location: 14715 - 15401 (+)
Type: TC
Location: 14715 - 15401 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp000434275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.