Cluster: CGMR013258_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR013258
- CGC Family ID: CGCFAM_00047
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_46791 | k141_46791_14 | 14379 | 16823 | - | GH94 |
| TF | k141_46791 | k141_46791_15 | 17247 | 18263 | + | LacI |
| NULL(UNKNOWN) | k141_46791 | k141_46791_16 | 18348 | 19739 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_46791 | k141_46791_17 | 19860 | 20774 | + | 3.A.1.1.4 |
| TC | k141_46791 | k141_46791_18 | 20780 | 21646 | + | 3.A.1.1.47 |
Gene ID: k141_46791_14
Type: CAZyme
Location: 14379 - 16823 (-)
Type: CAZyme
Location: 14379 - 16823 (-)
Gene ID: k141_46791_15
Type: TF
Location: 17247 - 18263 (+)
Type: TF
Location: 17247 - 18263 (+)
Gene ID: k141_46791_16
Type:
Location: 18348 - 19739 (+)
Type:
Location: 18348 - 19739 (+)
Gene ID: k141_46791_17
Type: TC
Location: 19860 - 20774 (+)
Type: TC
Location: 19860 - 20774 (+)
Gene ID: k141_46791_18
Type: TC
Location: 20780 - 21646 (+)
Type: TC
Location: 20780 - 21646 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp000434275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_46791_15 | vegetarian > omnivore | 1.18370 | 0.01882 |