Cluster: CGMR013258_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR013258
- CGC Family ID: CGCFAM_05409
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_43063 | k141_43063_21 | 20207 | 21895 | - | 2.A.114.1.3 |
| NULL(UNKNOWN) | k141_43063 | k141_43063_22 | 21977 | 22483 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_43063 | k141_43063_23 | 22351 | 23160 | - | Virul_fac_BrkB |
| CAZyme | k141_43063 | k141_43063_24 | 23204 | 24514 | - | GH13_20 |
| STP | k141_43063 | k141_43063_25 | 24530 | 26125 | - | GGDEF |
| TC | k141_43063 | k141_43063_26 | 26232 | 27182 | - | 1.A.1.24.5 |
Gene ID: k141_43063_21
Type: TC
Location: 20207 - 21895 (-)
Type: TC
Location: 20207 - 21895 (-)
Gene ID: k141_43063_22
Type:
Location: 21977 - 22483 (+)
Type:
Location: 21977 - 22483 (+)
Gene ID: k141_43063_23
Type: pfam
Location: 22351 - 23160 (-)
Type: pfam
Location: 22351 - 23160 (-)
Gene ID: k141_43063_24
Type: CAZyme
Location: 23204 - 24514 (-)
Type: CAZyme
Location: 23204 - 24514 (-)
Gene ID: k141_43063_25
Type: STP
Location: 24530 - 26125 (-)
Type: STP
Location: 24530 - 26125 (-)
Gene ID: k141_43063_26
Type: TC
Location: 26232 - 27182 (-)
Type: TC
Location: 26232 - 27182 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp000434275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.