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Genome Details

Selected Rep_genome_ID: CGMR001000
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→
Species
Bacteroides nordii
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR001000 5,048,549 94.85% 0.37% China Asia CGMR
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
CGMR001000_CGC37 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
CGMR001000_CGC66 CGCFAM_00001 Yes 7 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
CGMR001000_CGC51 CGCFAM_00003 Yes 10 5
CGMR001000_CGC42 CGCFAM_00006 Yes 7 1
CGMR001000_CGC55 CGCFAM_00006 Yes 7 4
CGMR001000_CGC9 CGCFAM_00006 Yes 8 4
CGMR001000_CGC87 CGCFAM_00007 Yes 9 6
CGMR001000_CGC52 CGCFAM_00017 Yes 7 3 fructan
CGMR001000_CGC29 CGCFAM_00023 Yes 5 2
CGMR001000_CGC47 CGCFAM_00023 Yes 6 4
CGMR001000_CGC81 CGCFAM_00025 Yes 5 2 pectin/alpha-glucan
CGMR001000_CGC1 CGCFAM_00050 Yes 11 5
CGMR001000_CGC25 CGCFAM_00079 Yes 3 1 pectin
CGMR001000_CGC76 CGCFAM_00079 Yes 6 3 pectin
CGMR001000_CGC38 CGCFAM_00138 Yes 4 2
CGMR001000_CGC30 CGCFAM_00175 Yes 9 4 alpha-glucan
CGMR001000_CGC17 CGCFAM_00180 Yes 17 11
CGMR001000_CGC28 CGCFAM_00298 Yes 16 10 pectin
CGMR001000_CGC5 CGCFAM_00303 Yes 3 1
CGMR001000_CGC80 CGCFAM_00303 Yes 3 1
CGMR001000_CGC63 CGCFAM_00322 Yes 3 1
CGMR001000_CGC16 CGCFAM_00349 Yes 4 1
CGMR001000_CGC18 CGCFAM_00363 Yes 12 4
CGMR001000_CGC36 CGCFAM_00441 Yes 3 1
CGMR001000_CGC67 CGCFAM_00535 Yes 5 2 galactan/host glycan
Top CAZyme Families