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Cluster: CGMR001000_CGC87

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_25364 k141_25364_56 81524 82960 + 2.A.66.2.6
CAZyme k141_25364 k141_25364_57 82973 83911 + GT2
CAZyme k141_25364 k141_25364_58 83908 84888 + GT2
CAZyme k141_25364 k141_25364_59 84919 85815 + GT2
CAZyme k141_25364 k141_25364_60 85812 87011 + GT4
pfam k141_25364 k141_25364_61 87030 88157 - Epimerase_2
pfam k141_25364 k141_25364_62 88157 89359 - UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme k141_25364 k141_25364_63 89406 90728 + GT4
CAZyme k141_25364 k141_25364_64 90721 91467 + GT2
Gene ID: k141_25364_56
Type: TC
Location: 81524 - 82960 (+)
Gene ID: k141_25364_57
Type: CAZyme
Location: 82973 - 83911 (+)
Gene ID: k141_25364_58
Type: CAZyme
Location: 83908 - 84888 (+)
Gene ID: k141_25364_59
Type: CAZyme
Location: 84919 - 85815 (+)
Gene ID: k141_25364_60
Type: CAZyme
Location: 85812 - 87011 (+)
Gene ID: k141_25364_61
Type: pfam
Location: 87030 - 88157 (-)
Gene ID: k141_25364_62
Type: pfam
Location: 88157 - 89359 (-)
Gene ID: k141_25364_63
Type: CAZyme
Location: 89406 - 90728 (+)
Gene ID: k141_25364_64
Type: CAZyme
Location: 90721 - 91467 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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