Cluster: CGMR001000_CGC66
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: CGMR001000
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_15443 | k141_15443_19 | 26795 | 27655 | + | GH73 |
| pfam | k141_15443 | k141_15443_20 | 27814 | 29061 | + | HlyD_3 |
| TC | k141_15443 | k141_15443_21 | 29331 | 32390 | + | 1.B.14.6.1 |
| pfam | k141_15443 | k141_15443_22 | 32423 | 33910 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_15443 | k141_15443_23 | 34563 | 36299 | - | PL1_2 |
| CAZyme | k141_15443 | k141_15443_24 | 36404 | 38218 | - | PL1_2 |
| TC | k141_15443 | k141_15443_25 | 38719 | 39384 | + | 3.A.1.122.2 |
Gene ID: k141_15443_19
Type: CAZyme
Location: 26795 - 27655 (+)
Type: CAZyme
Location: 26795 - 27655 (+)
Gene ID: k141_15443_20
Type: pfam
Location: 27814 - 29061 (+)
Type: pfam
Location: 27814 - 29061 (+)
Gene ID: k141_15443_21
Type: TC
Location: 29331 - 32390 (+)
Type: TC
Location: 29331 - 32390 (+)
Gene ID: k141_15443_22
Type: pfam
Location: 32423 - 33910 (+)
Type: pfam
Location: 32423 - 33910 (+)
Gene ID: k141_15443_23
Type: CAZyme
Location: 34563 - 36299 (-)
Type: CAZyme
Location: 34563 - 36299 (-)
Gene ID: k141_15443_24
Type: CAZyme
Location: 36404 - 38218 (-)
Type: CAZyme
Location: 36404 - 38218 (-)
Gene ID: k141_15443_25
Type: TC
Location: 38719 - 39384 (+)
Type: TC
Location: 38719 - 39384 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides nordii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.