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Cluster: CGMR001000_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_15568 k141_15568_22 22543 26853 - GH85
TC k141_15568 k141_15568_23 26943 28766 - 8.A.46.2.1
TC k141_15568 k141_15568_24 28787 32164 - 1.B.14.6.2
CAZyme k141_15568 k141_15568_25 32628 34904 - GH92
STP k141_15568 k141_15568_26 34971 35969 - FecR
TF k141_15568 k141_15568_27 36021 36575 - GerE
CAZyme k141_15568 k141_15568_28 36592 38808 - GH92
pfam k141_15568 k141_15568_29 39004 41622 - tRNA-synt_2c | DHHA1 | tRNA_SAD
TC k141_15568 k141_15568_30 41815 42783 + 1.A.34.1.3
TF k141_15568 k141_15568_31 42786 43130 + MerR
STP k141_15568 k141_15568_32 43175 45424 - HD
CAZyme k141_15568 k141_15568_33 45493 46788 - GH23
Gene ID: k141_15568_22
Type: CAZyme
Location: 22543 - 26853 (-)
Gene ID: k141_15568_23
Type: TC
Location: 26943 - 28766 (-)
Gene ID: k141_15568_24
Type: TC
Location: 28787 - 32164 (-)
Gene ID: k141_15568_25
Type: CAZyme
Location: 32628 - 34904 (-)
Gene ID: k141_15568_26
Type: STP
Location: 34971 - 35969 (-)
Gene ID: k141_15568_27
Type: TF
Location: 36021 - 36575 (-)
Gene ID: k141_15568_28
Type: CAZyme
Location: 36592 - 38808 (-)
Gene ID: k141_15568_29
Type: pfam
Location: 39004 - 41622 (-)
Gene ID: k141_15568_30
Type: TC
Location: 41815 - 42783 (+)
Gene ID: k141_15568_31
Type: TF
Location: 42786 - 43130 (+)
Gene ID: k141_15568_32
Type: STP
Location: 43175 - 45424 (-)
Gene ID: k141_15568_33
Type: CAZyme
Location: 45493 - 46788 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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