Cluster: CGMR001000_CGC1
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR001000
- CGC Family ID: CGCFAM_00050
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_14456 | k141_14456_37 | 40844 | 41305 | - | 9.B.18.1.1 |
| CAZyme | k141_14456 | k141_14456_38 | 41485 | 42588 | - | GT4 |
| pfam | k141_14456 | k141_14456_39 | 42585 | 43607 | - | Radical_SAM | SPASM |
| CAZyme | k141_14456 | k141_14456_40 | 43888 | 45729 | - | GH29 |
| NULL(UNKNOWN) | k141_14456 | k141_14456_41 | 45732 | 46649 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_14456 | k141_14456_42 | 46662 | 48092 | - | 2.A.50.2.1 |
| NULL(UNKNOWN) | k141_14456 | k141_14456_43 | 48157 | 50226 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_14456 | k141_14456_44 | 50399 | 52141 | - | GH29 |
| pfam | k141_14456 | k141_14456_45 | 52176 | 52922 | - | Polysacc_deac_1 | DUF2334 |
| CAZyme | k141_14456 | k141_14456_46 | 52953 | 54245 | - | GT4 |
| CAZyme | k141_14456 | k141_14456_47 | 54242 | 55276 | - | GT4 |
Gene ID: k141_14456_37
Type: TC
Location: 40844 - 41305 (-)
Type: TC
Location: 40844 - 41305 (-)
Gene ID: k141_14456_38
Type: CAZyme
Location: 41485 - 42588 (-)
Type: CAZyme
Location: 41485 - 42588 (-)
Gene ID: k141_14456_39
Type: pfam
Location: 42585 - 43607 (-)
Type: pfam
Location: 42585 - 43607 (-)
Gene ID: k141_14456_40
Type: CAZyme
Location: 43888 - 45729 (-)
Type: CAZyme
Location: 43888 - 45729 (-)
Gene ID: k141_14456_41
Type:
Location: 45732 - 46649 (-)
Type:
Location: 45732 - 46649 (-)
Gene ID: k141_14456_42
Type: TC
Location: 46662 - 48092 (-)
Type: TC
Location: 46662 - 48092 (-)
Gene ID: k141_14456_43
Type:
Location: 48157 - 50226 (-)
Type:
Location: 48157 - 50226 (-)
Gene ID: k141_14456_44
Type: CAZyme
Location: 50399 - 52141 (-)
Type: CAZyme
Location: 50399 - 52141 (-)
Gene ID: k141_14456_45
Type: pfam
Location: 52176 - 52922 (-)
Type: pfam
Location: 52176 - 52922 (-)
Gene ID: k141_14456_46
Type: CAZyme
Location: 52953 - 54245 (-)
Type: CAZyme
Location: 52953 - 54245 (-)
Gene ID: k141_14456_47
Type: CAZyme
Location: 54242 - 55276 (-)
Type: CAZyme
Location: 54242 - 55276 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides nordii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.