Cluster: CGMR001000_CGC17
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 11
- Substrate:
- Genome ID: CGMR001000
- CGC Family ID: CGCFAM_00180
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_19012 | k141_19012_16 | 22754 | 23845 | + | GT4 |
| pfam | k141_19012 | k141_19012_17 | 23927 | 24532 | + | DUF4254 |
| CAZyme | k141_19012 | k141_19012_18 | 24536 | 25573 | + | GT9 |
| CAZyme | k141_19012 | k141_19012_19 | 25593 | 26576 | + | GT2 |
| pfam | k141_19012 | k141_19012_20 | 26590 | 26973 | + | GtrA_DPMS_TM |
| pfam | k141_19012 | k141_19012_21 | 26978 | 27883 | + | Lip_A_acyltrans |
| CAZyme | k141_19012 | k141_19012_22 | 27889 | 29016 | - | GT4 |
| pfam | k141_19012 | k141_19012_23 | 29132 | 31072 | + | Sulfatase |
| CAZyme | k141_19012 | k141_19012_24 | 31380 | 32336 | - | GT2 |
| CAZyme | k141_19012 | k141_19012_25 | 32336 | 33310 | - | GT2 |
| CAZyme | k141_19012 | k141_19012_26 | 33291 | 34016 | - | GT2 |
| CAZyme | k141_19012 | k141_19012_27 | 34248 | 35213 | + | GT2 |
| CAZyme | k141_19012 | k141_19012_28 | 35213 | 36415 | + | GT4 |
| CAZyme | k141_19012 | k141_19012_29 | 36464 | 37309 | - | GT2 |
| pfam | k141_19012 | k141_19012_30 | 37369 | 38331 | - | GT-D-like |
| CAZyme | k141_19012 | k141_19012_31 | 38489 | 39424 | + | GT23 |
| TC | k141_19012 | k141_19012_32 | 39570 | 41402 | + | 3.A.1.106.1 |
Gene ID: k141_19012_16
Type: CAZyme
Location: 22754 - 23845 (+)
Type: CAZyme
Location: 22754 - 23845 (+)
Gene ID: k141_19012_17
Type: pfam
Location: 23927 - 24532 (+)
Type: pfam
Location: 23927 - 24532 (+)
Gene ID: k141_19012_18
Type: CAZyme
Location: 24536 - 25573 (+)
Type: CAZyme
Location: 24536 - 25573 (+)
Gene ID: k141_19012_19
Type: CAZyme
Location: 25593 - 26576 (+)
Type: CAZyme
Location: 25593 - 26576 (+)
Gene ID: k141_19012_20
Type: pfam
Location: 26590 - 26973 (+)
Type: pfam
Location: 26590 - 26973 (+)
Gene ID: k141_19012_21
Type: pfam
Location: 26978 - 27883 (+)
Type: pfam
Location: 26978 - 27883 (+)
Gene ID: k141_19012_22
Type: CAZyme
Location: 27889 - 29016 (-)
Type: CAZyme
Location: 27889 - 29016 (-)
Gene ID: k141_19012_23
Type: pfam
Location: 29132 - 31072 (+)
Type: pfam
Location: 29132 - 31072 (+)
Gene ID: k141_19012_24
Type: CAZyme
Location: 31380 - 32336 (-)
Type: CAZyme
Location: 31380 - 32336 (-)
Gene ID: k141_19012_25
Type: CAZyme
Location: 32336 - 33310 (-)
Type: CAZyme
Location: 32336 - 33310 (-)
Gene ID: k141_19012_26
Type: CAZyme
Location: 33291 - 34016 (-)
Type: CAZyme
Location: 33291 - 34016 (-)
Gene ID: k141_19012_27
Type: CAZyme
Location: 34248 - 35213 (+)
Type: CAZyme
Location: 34248 - 35213 (+)
Gene ID: k141_19012_28
Type: CAZyme
Location: 35213 - 36415 (+)
Type: CAZyme
Location: 35213 - 36415 (+)
Gene ID: k141_19012_29
Type: CAZyme
Location: 36464 - 37309 (-)
Type: CAZyme
Location: 36464 - 37309 (-)
Gene ID: k141_19012_30
Type: pfam
Location: 37369 - 38331 (-)
Type: pfam
Location: 37369 - 38331 (-)
Gene ID: k141_19012_31
Type: CAZyme
Location: 38489 - 39424 (+)
Type: CAZyme
Location: 38489 - 39424 (+)
Gene ID: k141_19012_32
Type: TC
Location: 39570 - 41402 (+)
Type: TC
Location: 39570 - 41402 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides nordii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.