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Cluster: CGMR001000_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_6972 k141_6972_12 16101 18248 - GH97
CAZyme k141_6972 k141_6972_13 18269 19594 - GH13
CAZyme k141_6972 k141_6972_14 19600 20943 - GH13
pfam k141_6972 k141_6972_15 20958 22382 - CBM26
pfam k141_6972 k141_6972_16 22401 24194 - SusD_RagB | SusD-like_3
TC k141_6972 k141_6972_17 24227 27193 - 1.B.14.6.1
pfam k141_6972 k141_6972_18 27396 29045 - DUF6377
pfam k141_6972 k141_6972_19 29520 32135 + DUF4886
CAZyme k141_6972 k141_6972_20 32445 35438 + GH3
Gene ID: k141_6972_12
Type: CAZyme
Location: 16101 - 18248 (-)
Gene ID: k141_6972_13
Type: CAZyme
Location: 18269 - 19594 (-)
Gene ID: k141_6972_14
Type: CAZyme
Location: 19600 - 20943 (-)
Gene ID: k141_6972_15
Type: pfam
Location: 20958 - 22382 (-)
Gene ID: k141_6972_16
Type: pfam
Location: 22401 - 24194 (-)
Gene ID: k141_6972_17
Type: TC
Location: 24227 - 27193 (-)
Gene ID: k141_6972_18
Type: pfam
Location: 27396 - 29045 (-)
Gene ID: k141_6972_19
Type: pfam
Location: 29520 - 32135 (+)
Gene ID: k141_6972_20
Type: CAZyme
Location: 32445 - 35438 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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