Cluster: CGMR001000_CGC55
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR001000
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_4141 | k141_4141_5 | 3789 | 4712 | + | GT8 |
| CAZyme | k141_4141 | k141_4141_6 | 4818 | 5906 | + | GT4 |
| CAZyme | k141_4141 | k141_4141_7 | 5903 | 6739 | + | GT2 |
| CAZyme | k141_4141 | k141_4141_8 | 6822 | 7928 | + | GT4 |
| TC | k141_4141 | k141_4141_9 | 7940 | 8584 | + | 9.B.18.1.2 |
| pfam | k141_4141 | k141_4141_10 | 8588 | 9190 | + | Hexapep | Hexapep_2 | PglD_N |
| TC | k141_4141 | k141_4141_11 | 9293 | 11209 | + | 9.B.18.2.1 |
Gene ID: k141_4141_5
Type: CAZyme
Location: 3789 - 4712 (+)
Type: CAZyme
Location: 3789 - 4712 (+)
Gene ID: k141_4141_6
Type: CAZyme
Location: 4818 - 5906 (+)
Type: CAZyme
Location: 4818 - 5906 (+)
Gene ID: k141_4141_7
Type: CAZyme
Location: 5903 - 6739 (+)
Type: CAZyme
Location: 5903 - 6739 (+)
Gene ID: k141_4141_8
Type: CAZyme
Location: 6822 - 7928 (+)
Type: CAZyme
Location: 6822 - 7928 (+)
Gene ID: k141_4141_9
Type: TC
Location: 7940 - 8584 (+)
Type: TC
Location: 7940 - 8584 (+)
Gene ID: k141_4141_10
Type: pfam
Location: 8588 - 9190 (+)
Type: pfam
Location: 8588 - 9190 (+)
Gene ID: k141_4141_11
Type: TC
Location: 9293 - 11209 (+)
Type: TC
Location: 9293 - 11209 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides nordii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.