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Genome Details

Selected Rep_genome_ID: C37.bin_1
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Coprobacteraceae
→
Genus
Coprobacter
→
Species
Coprobacter fastidiosus
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
C37.bin_1 3,620,294 99.62% 0% China(Inner Mongolia) Asia IMGG
CGMR066725 3,331,754 99.62% 0% China Asia CGMR
Rep_432 3,654,068 98.8679% 0% NA NA WIS
SW005_6 3,455,894 98.87% 0% NA Africa H3AfricaPhase2
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
C37.bin_1_CGC30 CGCFAM_00033 Yes 4 2
C37.bin_1_CGC43 CGCFAM_00061 Yes 3 1
C37.bin_1_CGC35 CGCFAM_00095 Yes 9 4
C37.bin_1_CGC31 CGCFAM_00151 Yes 5 3
C37.bin_1_CGC48 CGCFAM_00288 Yes 3 1
C37.bin_1_CGC56 CGCFAM_00300 Yes 6 1
C37.bin_1_CGC54 CGCFAM_00358 Yes 4 3
C37.bin_1_CGC25 CGCFAM_00461 Yes 8 2
C37.bin_1_CGC60 CGCFAM_00494 Yes 12 7
C37.bin_1_CGC39 CGCFAM_00588 Yes 6 2
C37.bin_1_CGC58 CGCFAM_00732 Yes 7 4
C37.bin_1_CGC59 CGCFAM_00773 Yes 5 2
C37.bin_1_CGC24 CGCFAM_00821 Yes 11 8 pectin
C37.bin_1_CGC5 CGCFAM_00822 Yes 3 1 host glycan
C37.bin_1_CGC42 CGCFAM_01254 Yes 21 14
C37.bin_1_CGC28 CGCFAM_01854 Yes 3 1
C37.bin_1_CGC14 CGCFAM_01916 Yes 9 5
C37.bin_1_CGC22 CGCFAM_01919 Yes 6 4
C37.bin_1_CGC27 CGCFAM_02165 Yes 3 1
C37.bin_1_CGC4 CGCFAM_04500 Yes 8 1
C37.bin_1_CGC3 CGCFAM_05228 Yes 18 8
C37.bin_1_CGC41 CGCFAM_05229 Yes 9 4
C37.bin_1_CGC8 CGCFAM_06502 Yes 12 6
C37.bin_1_CGC26 CGCFAM_07423 Yes 8 1
C37.bin_1_CGC6 CGCFAM_07426 Yes 6 1
Top CAZyme Families