Cluster: C37.bin_1_CGC35
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: C37.bin_1
- CGC Family ID: CGCFAM_00095
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C37_contig_1551 | C37_contig_1551_581 | 719380 | 722427 | - | PL8_2 |
| CAZyme | C37_contig_1551 | C37_contig_1551_582 | 722645 | 723853 | - | GH88 |
| TC | C37_contig_1551 | C37_contig_1551_583 | 724282 | 727392 | + | 1.B.14.6.1 |
| TC | C37_contig_1551 | C37_contig_1551_584 | 727415 | 729163 | + | 8.A.46.1.3 |
| pfam | C37_contig_1551 | C37_contig_1551_585 | 729183 | 730196 | + | DUF5017 |
| CAZyme | C37_contig_1551 | C37_contig_1551_586 | 730391 | 733300 | + | PL8_2 |
| pfam | C37_contig_1551 | C37_contig_1551_587 | 733327 | 733899 | + | CBM_4_9 |
| NULL(UNKNOWN) | C37_contig_1551 | C37_contig_1551_588 | 733927 | 735225 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C37_contig_1551 | C37_contig_1551_589 | 735315 | 738506 | + | PL8_2 |
Gene ID: C37_contig_1551_581
Type: CAZyme
Location: 719380 - 722427 (-)
Type: CAZyme
Location: 719380 - 722427 (-)
Gene ID: C37_contig_1551_582
Type: CAZyme
Location: 722645 - 723853 (-)
Type: CAZyme
Location: 722645 - 723853 (-)
Gene ID: C37_contig_1551_583
Type: TC
Location: 724282 - 727392 (+)
Type: TC
Location: 724282 - 727392 (+)
Gene ID: C37_contig_1551_584
Type: TC
Location: 727415 - 729163 (+)
Type: TC
Location: 727415 - 729163 (+)
Gene ID: C37_contig_1551_585
Type: pfam
Location: 729183 - 730196 (+)
Type: pfam
Location: 729183 - 730196 (+)
Gene ID: C37_contig_1551_586
Type: CAZyme
Location: 730391 - 733300 (+)
Type: CAZyme
Location: 730391 - 733300 (+)
Gene ID: C37_contig_1551_587
Type: pfam
Location: 733327 - 733899 (+)
Type: pfam
Location: 733327 - 733899 (+)
Gene ID: C37_contig_1551_588
Type:
Location: 733927 - 735225 (+)
Type:
Location: 733927 - 735225 (+)
Gene ID: C37_contig_1551_589
Type: CAZyme
Location: 735315 - 738506 (+)
Type: CAZyme
Location: 735315 - 738506 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter fastidiosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.