Genome Details
Selected Rep_genome_ID: C37.bin_1
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter fastidiosus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C37.bin_1 | 3,620,294 | 99.62% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR066725 | 3,331,754 | 99.62% | 0% | China | Asia | CGMR |
| Rep_432 | 3,654,068 | 98.8679% | 0% | NA | NA | WIS |
| SW005_6 | 3,455,894 | 98.87% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| C37.bin_1_CGC1 | CGCFAM_07963 | Yes | 5 | 2 | |
| C37.bin_1_CGC16 | CGCFAM_07964 | Yes | 5 | 1 | |
| C37.bin_1_CGC2 | CGCFAM_07965 | Yes | 7 | 1 | |
| C37.bin_1_CGC20 | CGCFAM_07966 | Yes | 3 | 1 | |
| C37.bin_1_CGC29 | CGCFAM_07967 | Yes | 6 | 2 | |
| C37.bin_1_CGC32 | CGCFAM_07968 | Yes | 11 | 1 | |
| C37.bin_1_CGC37 | CGCFAM_07969 | Yes | 4 | 1 | |
| C37.bin_1_CGC47 | CGCFAM_07971 | Yes | 13 | 5 | |
| C37.bin_1_CGC51 | CGCFAM_07972 | Yes | 6 | 1 | |
| C37.bin_1_CGC53 | CGCFAM_07973 | Yes | 6 | 2 | |
| C37.bin_1_CGC7 | CGCFAM_07974 | Yes | 17 | 3 |
Top CAZyme Families