Cluster: C37.bin_1_CGC47
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: C37.bin_1
- CGC Family ID: CGCFAM_07971
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C37_contig_1551 | C37_contig_1551_1203 | 1513876 | 1515771 | - | 2.A.9.3.1 |
| peptidase | C37_contig_1551 | C37_contig_1551_1204 | 1515812 | 1517416 | - | C26.964 |
| TC | C37_contig_1551 | C37_contig_1551_1205 | 1517683 | 1519113 | + | 9.B.168.1.2 |
| peptidase | C37_contig_1551 | C37_contig_1551_1206 | 1519174 | 1520952 | + | S01.UPB |
| CAZyme | C37_contig_1551 | C37_contig_1551_1207 | 1521304 | 1523235 | + | PL17 |
| sulfatase | C37_contig_1551 | C37_contig_1551_1208 | 1523244 | 1525010 | + | S1_36 |
| CAZyme | C37_contig_1551 | C37_contig_1551_1209 | 1525227 | 1526456 | + | GH43_2 |
| CAZyme | C37_contig_1551 | C37_contig_1551_1210 | 1526481 | 1528784 | + | GH92 |
| CAZyme | C37_contig_1551 | C37_contig_1551_1211 | 1528795 | 1531701 | + | GH2 |
| pfam | C37_contig_1551 | C37_contig_1551_1212 | 1531943 | 1533091 | + | FkbO_Hyg5-like_N |
| CAZyme | C37_contig_1551 | C37_contig_1551_1213 | 1533429 | 1536458 | + | GH95 |
| pfam | C37_contig_1551 | C37_contig_1551_1214 | 1536611 | 1537327 | + | Lipase_GDSL | Lipase_GDSL_2 |
| TC | C37_contig_1551 | C37_contig_1551_1215 | 1537361 | 1540069 | + | 9.B.14.3.1 |
Gene ID: C37_contig_1551_1203
Type: TC
Location: 1513876 - 1515771 (-)
Type: TC
Location: 1513876 - 1515771 (-)
Gene ID: C37_contig_1551_1204
Type: peptidase
Location: 1515812 - 1517416 (-)
Type: peptidase
Location: 1515812 - 1517416 (-)
Gene ID: C37_contig_1551_1205
Type: TC
Location: 1517683 - 1519113 (+)
Type: TC
Location: 1517683 - 1519113 (+)
Gene ID: C37_contig_1551_1206
Type: peptidase
Location: 1519174 - 1520952 (+)
Type: peptidase
Location: 1519174 - 1520952 (+)
Gene ID: C37_contig_1551_1207
Type: CAZyme
Location: 1521304 - 1523235 (+)
Type: CAZyme
Location: 1521304 - 1523235 (+)
Gene ID: C37_contig_1551_1208
Type: sulfatase
Location: 1523244 - 1525010 (+)
Type: sulfatase
Location: 1523244 - 1525010 (+)
Gene ID: C37_contig_1551_1209
Type: CAZyme
Location: 1525227 - 1526456 (+)
Type: CAZyme
Location: 1525227 - 1526456 (+)
Gene ID: C37_contig_1551_1210
Type: CAZyme
Location: 1526481 - 1528784 (+)
Type: CAZyme
Location: 1526481 - 1528784 (+)
Gene ID: C37_contig_1551_1211
Type: CAZyme
Location: 1528795 - 1531701 (+)
Type: CAZyme
Location: 1528795 - 1531701 (+)
Gene ID: C37_contig_1551_1212
Type: pfam
Location: 1531943 - 1533091 (+)
Type: pfam
Location: 1531943 - 1533091 (+)
Gene ID: C37_contig_1551_1213
Type: CAZyme
Location: 1533429 - 1536458 (+)
Type: CAZyme
Location: 1533429 - 1536458 (+)
Gene ID: C37_contig_1551_1214
Type: pfam
Location: 1536611 - 1537327 (+)
Type: pfam
Location: 1536611 - 1537327 (+)
Gene ID: C37_contig_1551_1215
Type: TC
Location: 1537361 - 1540069 (+)
Type: TC
Location: 1537361 - 1540069 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter fastidiosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.