Cluster: C37.bin_1_CGC39
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: C37.bin_1
- CGC Family ID: CGCFAM_00588
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C37_contig_1551 | C37_contig_1551_667 | 842689 | 843654 | + | GT2 |
| NULL(UNKNOWN) | C37_contig_1551 | C37_contig_1551_668 | 843670 | 844485 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | C37_contig_1551 | C37_contig_1551_669 | 844487 | 845590 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C37_contig_1551 | C37_contig_1551_670 | 845683 | 846693 | + | GT2 |
| peptidase | C37_contig_1551 | C37_contig_1551_671 | 846741 | 847820 | - | M20.UPA |
| TC | C37_contig_1551 | C37_contig_1551_672 | 848010 | 849821 | + | 4.C.1.1.14 |
Gene ID: C37_contig_1551_667
Type: CAZyme
Location: 842689 - 843654 (+)
Type: CAZyme
Location: 842689 - 843654 (+)
Gene ID: C37_contig_1551_668
Type:
Location: 843670 - 844485 (+)
Type:
Location: 843670 - 844485 (+)
Gene ID: C37_contig_1551_669
Type:
Location: 844487 - 845590 (-)
Type:
Location: 844487 - 845590 (-)
Gene ID: C37_contig_1551_670
Type: CAZyme
Location: 845683 - 846693 (+)
Type: CAZyme
Location: 845683 - 846693 (+)
Gene ID: C37_contig_1551_671
Type: peptidase
Location: 846741 - 847820 (-)
Type: peptidase
Location: 846741 - 847820 (-)
Gene ID: C37_contig_1551_672
Type: TC
Location: 848010 - 849821 (+)
Type: TC
Location: 848010 - 849821 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter fastidiosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.