Cluster: C37.bin_1_CGC41
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: C37.bin_1
- CGC Family ID: CGCFAM_05229
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C37_contig_1551 | C37_contig_1551_715 | 903805 | 904404 | + | 2.A.95.1.4 |
| STP | C37_contig_1551 | C37_contig_1551_716 | 904408 | 905394 | + | Fer4 |
| CAZyme | C37_contig_1551 | C37_contig_1551_717 | 905630 | 907576 | + | GH133 |
| CAZyme | C37_contig_1551 | C37_contig_1551_718 | 907589 | 908851 | + | GT4 |
| CAZyme | C37_contig_1551 | C37_contig_1551_719 | 908897 | 910276 | + | GH57 |
| CAZyme | C37_contig_1551 | C37_contig_1551_720 | 910759 | 912672 | - | GH37 |
| pfam | C37_contig_1551 | C37_contig_1551_721 | 912768 | 913850 | - | AA_kinase | PUA |
| pfam | C37_contig_1551 | C37_contig_1551_722 | 913866 | 914294 | - | DUF695 |
| TC | C37_contig_1551 | C37_contig_1551_723 | 914306 | 915961 | - | 2.A.1.42.2 |
Gene ID: C37_contig_1551_715
Type: TC
Location: 903805 - 904404 (+)
Type: TC
Location: 903805 - 904404 (+)
Gene ID: C37_contig_1551_716
Type: STP
Location: 904408 - 905394 (+)
Type: STP
Location: 904408 - 905394 (+)
Gene ID: C37_contig_1551_717
Type: CAZyme
Location: 905630 - 907576 (+)
Type: CAZyme
Location: 905630 - 907576 (+)
Gene ID: C37_contig_1551_718
Type: CAZyme
Location: 907589 - 908851 (+)
Type: CAZyme
Location: 907589 - 908851 (+)
Gene ID: C37_contig_1551_719
Type: CAZyme
Location: 908897 - 910276 (+)
Type: CAZyme
Location: 908897 - 910276 (+)
Gene ID: C37_contig_1551_720
Type: CAZyme
Location: 910759 - 912672 (-)
Type: CAZyme
Location: 910759 - 912672 (-)
Gene ID: C37_contig_1551_721
Type: pfam
Location: 912768 - 913850 (-)
Type: pfam
Location: 912768 - 913850 (-)
Gene ID: C37_contig_1551_722
Type: pfam
Location: 913866 - 914294 (-)
Type: pfam
Location: 913866 - 914294 (-)
Gene ID: C37_contig_1551_723
Type: TC
Location: 914306 - 915961 (-)
Type: TC
Location: 914306 - 915961 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter fastidiosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.