Genome Details
Selected Rep_genome_ID: B36.bin_9
Total Genomes Found: 15
Total Genomes Found: 15
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira pectinoschiza_A
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| B36.bin_9 | 3,245,298 | 99.33% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR004151 | 2,571,121 | 99.33% | 0% | China | Asia | CGMR |
| HRGMv2_2061 | 2,845,721 | 99.32% | 0% | Japan | Asia | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Nepal_MoBio_Fiber-Hadza-Nepal_J_1_RAJ1015YZ.19 | 2,623,744 | 99.33% | 0% | NA | Africa | Hadza |
| Rep_2369 | 2,927,646 | 99.3289% | 0% | NA | NA | WIS |
| SPMP10_bin.39 | 2,420,125 | 90.55% | 0.56% | Singapore | Asia | SPMP |
| SPMP106_bin.43 | 2,620,011 | 95.64% | 1.9% | Singapore | Asia | SPMP |
| SPMP15_bin.53 | 2,719,060 | 95.95% | 0% | Singapore | Asia | SPMP |
| SPMP16_bin.25 | 2,651,548 | 95.64% | 0% | Singapore | Asia | SPMP |
| SPMP21_bin.21 | 2,755,511 | 97.76% | 0% | Singapore | Asia | SPMP |
| SPMP23_bin.92 | 2,661,978 | 97.09% | 0% | Singapore | Asia | SPMP |
| SPMP39_bin.38 | 2,743,332 | 96.53% | 0% | Singapore | Asia | SPMP |
| SPMP68_bin.13 | 2,502,766 | 95.73% | 0% | Singapore | Asia | SPMP |
| SPMP71_bin.103 | 2,569,086 | 95.64% | 0.5% | Singapore | Asia | SPMP |
| SW223_88 | 2,632,547 | 98.66% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| B36.bin_9_CGC10 | CGCFAM_00003 | Yes | 13 | 5 | |
| B36.bin_9_CGC5 | CGCFAM_00011 | Yes | 3 | 1 | |
| B36.bin_9_CGC8 | CGCFAM_00157 | Yes | 4 | 1 | |
| B36.bin_9_CGC18 | CGCFAM_00344 | Yes | 3 | 1 | |
| B36.bin_9_CGC23 | CGCFAM_00348 | Yes | 9 | 5 | |
| B36.bin_9_CGC27 | CGCFAM_00905 | Yes | 9 | 3 | |
| B36.bin_9_CGC12 | CGCFAM_01198 | Yes | 7 | 1 | |
| B36.bin_9_CGC19 | CGCFAM_01402 | Yes | 4 | 1 | |
| B36.bin_9_CGC16 | CGCFAM_02080 | Yes | 6 | 1 | |
| B36.bin_9_CGC21 | CGCFAM_03431 | Yes | 3 | 1 | |
| B36.bin_9_CGC11 | CGCFAM_04933 | Yes | 4 | 1 | |
| B36.bin_9_CGC6 | CGCFAM_04934 | Yes | 3 | 2 | |
| B36.bin_9_CGC15 | CGCFAM_07477 | Yes | 7 | 1 | |
| B36.bin_9_CGC3 | CGCFAM_07478 | Yes | 15 | 1 |
Top CAZyme Families