Cluster: B36.bin_9_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: B36.bin_9
- CGC Family ID: CGCFAM_02080
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B36_contig_110 | B36_contig_110_1236 | 1392901 | 1394751 | + | 3.D.1.5.1 |
| TC | B36_contig_110 | B36_contig_110_1237 | 1394745 | 1396433 | + | 3.D.1.6.3 |
| pfam | B36_contig_110 | B36_contig_110_1238 | 1396564 | 1397802 | + | DUF1015 |
| peptidase | B36_contig_110 | B36_contig_110_1239 | 1397855 | 1398703 | + | S09.UPW |
| CAZyme | B36_contig_110 | B36_contig_110_1240 | 1398731 | 1401193 | + | GH13_9 |
| TC | B36_contig_110 | B36_contig_110_1241 | 1401345 | 1402154 | + | 1.A.23.2.1 |
Gene ID: B36_contig_110_1236
Type: TC
Location: 1392901 - 1394751 (+)
Type: TC
Location: 1392901 - 1394751 (+)
Gene ID: B36_contig_110_1237
Type: TC
Location: 1394745 - 1396433 (+)
Type: TC
Location: 1394745 - 1396433 (+)
Gene ID: B36_contig_110_1238
Type: pfam
Location: 1396564 - 1397802 (+)
Type: pfam
Location: 1396564 - 1397802 (+)
Gene ID: B36_contig_110_1239
Type: peptidase
Location: 1397855 - 1398703 (+)
Type: peptidase
Location: 1397855 - 1398703 (+)
Gene ID: B36_contig_110_1240
Type: CAZyme
Location: 1398731 - 1401193 (+)
Type: CAZyme
Location: 1398731 - 1401193 (+)
Gene ID: B36_contig_110_1241
Type: TC
Location: 1401345 - 1402154 (+)
Type: TC
Location: 1401345 - 1402154 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira pectinoschiza_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B36_contig_110_1240 | vegetarian > vegan | 1.05983 | 0.00110 |
| B36_contig_110_1241 | vegetarian > vegan | 1.19575 | 0.00110 |