Cluster: B36.bin_9_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: B36.bin_9
- CGC Family ID: CGCFAM_04933
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B36_contig_110 | B36_contig_110_590 | 687654 | 688814 | + | GH109 |
| pfam | B36_contig_110 | B36_contig_110_591 | 688893 | 689792 | - | Methyltransf_15 | Methyltrans_SAM |
| TC | B36_contig_110 | B36_contig_110_592 | 690121 | 692310 | + | 2.A.53.1.4 |
| TC | B36_contig_110 | B36_contig_110_593 | 692350 | 694266 | + | 3.A.1.120.6 |
Gene ID: B36_contig_110_590
Type: CAZyme
Location: 687654 - 688814 (+)
Type: CAZyme
Location: 687654 - 688814 (+)
Gene ID: B36_contig_110_591
Type: pfam
Location: 688893 - 689792 (-)
Type: pfam
Location: 688893 - 689792 (-)
Gene ID: B36_contig_110_592
Type: TC
Location: 690121 - 692310 (+)
Type: TC
Location: 690121 - 692310 (+)
Gene ID: B36_contig_110_593
Type: TC
Location: 692350 - 694266 (+)
Type: TC
Location: 692350 - 694266 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira pectinoschiza_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B36_contig_110_590 | vegetarian > vegan | 1.54011 | 0.00110 |
| B36_contig_110_592 | vegetarian > vegan | 1.11467 | 0.00110 |