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Cluster: B36.bin_9_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B36_contig_110 B36_contig_110_2402 2563225 2565063 - 3.A.1.106.2
CAZyme B36_contig_110 B36_contig_110_2403 2565168 2566724 - GH28
NULL(UNKNOWN) B36_contig_110 B36_contig_110_2404 2566715 2567656 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme B36_contig_110 B36_contig_110_2405 2567784 2569736 - CBM91 | GH43_12
TC B36_contig_110 B36_contig_110_2406 2569947 2570810 - 3.A.1.1.29
TC B36_contig_110 B36_contig_110_2407 2570822 2572318 - 3.A.1.1.29
STP B36_contig_110 B36_contig_110_2408 2572452 2574020 - SBP_bac_1
pfam B36_contig_110 B36_contig_110_2409 2574443 2575084 - UPF0029 | DUF1949
CAZyme B36_contig_110 B36_contig_110_2410 2575238 2578003 + GT51
Gene ID: B36_contig_110_2402
Type: TC
Location: 2563225 - 2565063 (-)
Gene ID: B36_contig_110_2403
Type: CAZyme
Location: 2565168 - 2566724 (-)
Gene ID: B36_contig_110_2404
Type:
Location: 2566715 - 2567656 (-)
Gene ID: B36_contig_110_2405
Type: CAZyme
Location: 2567784 - 2569736 (-)
Gene ID: B36_contig_110_2406
Type: TC
Location: 2569947 - 2570810 (-)
Gene ID: B36_contig_110_2407
Type: TC
Location: 2570822 - 2572318 (-)
Gene ID: B36_contig_110_2408
Type: STP
Location: 2572452 - 2574020 (-)
Gene ID: B36_contig_110_2409
Type: pfam
Location: 2574443 - 2575084 (-)
Gene ID: B36_contig_110_2410
Type: CAZyme
Location: 2575238 - 2578003 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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