Cluster: B36.bin_9_CGC23
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 5
- Substrate:
- Genome ID: B36.bin_9
- CGC Family ID: CGCFAM_00348
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B36_contig_110 | B36_contig_110_2176 | 2292978 | 2294435 | - | 2.A.66.2.16 |
| CAZyme | B36_contig_110 | B36_contig_110_2177 | 2294454 | 2296919 | - | GT4 |
| CAZyme | B36_contig_110 | B36_contig_110_2178 | 2296938 | 2297984 | - | GT113 |
| CAZyme | B36_contig_110 | B36_contig_110_2179 | 2298003 | 2299124 | - | GT4 |
| CAZyme | B36_contig_110 | B36_contig_110_2180 | 2299127 | 2300236 | - | GT4 |
| CAZyme | B36_contig_110 | B36_contig_110_2181 | 2300335 | 2301114 | - | GT111 |
| TC | B36_contig_110 | B36_contig_110_2182 | 2301130 | 2302557 | - | 9.B.18.1.2 |
| STP | B36_contig_110 | B36_contig_110_2183 | 2302677 | 2304515 | - | SIS | SIS |
| TC | B36_contig_110 | B36_contig_110_2184 | 2304745 | 2306154 | - | 1.B.52.2.1 |
Gene ID: B36_contig_110_2176
Type: TC
Location: 2292978 - 2294435 (-)
Type: TC
Location: 2292978 - 2294435 (-)
Gene ID: B36_contig_110_2177
Type: CAZyme
Location: 2294454 - 2296919 (-)
Type: CAZyme
Location: 2294454 - 2296919 (-)
Gene ID: B36_contig_110_2178
Type: CAZyme
Location: 2296938 - 2297984 (-)
Type: CAZyme
Location: 2296938 - 2297984 (-)
Gene ID: B36_contig_110_2179
Type: CAZyme
Location: 2298003 - 2299124 (-)
Type: CAZyme
Location: 2298003 - 2299124 (-)
Gene ID: B36_contig_110_2180
Type: CAZyme
Location: 2299127 - 2300236 (-)
Type: CAZyme
Location: 2299127 - 2300236 (-)
Gene ID: B36_contig_110_2181
Type: CAZyme
Location: 2300335 - 2301114 (-)
Type: CAZyme
Location: 2300335 - 2301114 (-)
Gene ID: B36_contig_110_2182
Type: TC
Location: 2301130 - 2302557 (-)
Type: TC
Location: 2301130 - 2302557 (-)
Gene ID: B36_contig_110_2183
Type: STP
Location: 2302677 - 2304515 (-)
Type: STP
Location: 2302677 - 2304515 (-)
Gene ID: B36_contig_110_2184
Type: TC
Location: 2304745 - 2306154 (-)
Type: TC
Location: 2304745 - 2306154 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira pectinoschiza_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B36_contig_110_2178 | vegetarian > vegan | 1.36685 | 0.00110 |
| B36_contig_110_2179 | vegetarian > vegan | 1.58310 | 0.00110 |
| B36_contig_110_2180 | vegetarian > vegan | 1.59809 | 0.00110 |
| B36_contig_110_2181 | vegetarian > vegan | 1.91788 | 0.00110 |
| B36_contig_110_2182 | vegetarian > vegan | 1.13851 | 0.00110 |
| B36_contig_110_2184 | vegetarian > vegan | 1.87560 | 0.00110 |