Cluster: B36.bin_9_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: B36.bin_9
- CGC Family ID: CGCFAM_00157
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B36_contig_110 | B36_contig_110_155 | 176217 | 177518 | - | 2.A.56.1.5 |
| TC | B36_contig_110 | B36_contig_110_156 | 177528 | 178016 | - | 2.A.56.1.5 |
| TC | B36_contig_110 | B36_contig_110_157 | 178019 | 179062 | - | 2.A.56.1.3 |
| CAZyme | B36_contig_110 | B36_contig_110_158 | 179187 | 181700 | - | GH31_2 |
Gene ID: B36_contig_110_155
Type: TC
Location: 176217 - 177518 (-)
Type: TC
Location: 176217 - 177518 (-)
Gene ID: B36_contig_110_156
Type: TC
Location: 177528 - 178016 (-)
Type: TC
Location: 177528 - 178016 (-)
Gene ID: B36_contig_110_157
Type: TC
Location: 178019 - 179062 (-)
Type: TC
Location: 178019 - 179062 (-)
Gene ID: B36_contig_110_158
Type: CAZyme
Location: 179187 - 181700 (-)
Type: CAZyme
Location: 179187 - 181700 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira pectinoschiza_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B36_contig_110_155 | vegetarian > vegan | 1.60346 | 0.00110 |
| B36_contig_110_156 | vegetarian > vegan | 1.69151 | 0.00110 |
| B36_contig_110_157 | vegetarian > omnivore | 1.36296 | 0.00842 |
| B36_contig_110_157 | vegetarian > vegan | 1.90705 | 0.00110 |
| B36_contig_110_158 | vegetarian > vegan | 1.67746 | 0.00110 |