Cluster: B36.bin_9_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: B36.bin_9
- CGC Family ID: CGCFAM_07477
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B36_contig_110 | B36_contig_110_1215 | 1360680 | 1362437 | + | 1.A.11.2.7 |
| STP | B36_contig_110 | B36_contig_110_1216 | 1362685 | 1363584 | + | Pyr_redox_2 |
| CAZyme | B36_contig_110 | B36_contig_110_1217 | 1363716 | 1365161 | - | CE4 |
| pfam | B36_contig_110 | B36_contig_110_1218 | 1365442 | 1369002 | + | POR | POR_N | TPP_enzyme_C | EKR | Fer4_7 | PFOR_II |
| NULL(UNKNOWN) | B36_contig_110 | B36_contig_110_1219 | 1369128 | 1369832 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B36_contig_110 | B36_contig_110_1220 | 1369866 | 1371200 | + | 2.A.66.1.25 |
| TC | B36_contig_110 | B36_contig_110_1221 | 1371321 | 1372730 | + | 9.A.11.1.1 |
Gene ID: B36_contig_110_1215
Type: TC
Location: 1360680 - 1362437 (+)
Type: TC
Location: 1360680 - 1362437 (+)
Gene ID: B36_contig_110_1216
Type: STP
Location: 1362685 - 1363584 (+)
Type: STP
Location: 1362685 - 1363584 (+)
Gene ID: B36_contig_110_1217
Type: CAZyme
Location: 1363716 - 1365161 (-)
Type: CAZyme
Location: 1363716 - 1365161 (-)
Gene ID: B36_contig_110_1218
Type: pfam
Location: 1365442 - 1369002 (+)
Type: pfam
Location: 1365442 - 1369002 (+)
Gene ID: B36_contig_110_1219
Type:
Location: 1369128 - 1369832 (+)
Type:
Location: 1369128 - 1369832 (+)
Gene ID: B36_contig_110_1220
Type: TC
Location: 1369866 - 1371200 (+)
Type: TC
Location: 1369866 - 1371200 (+)
Gene ID: B36_contig_110_1221
Type: TC
Location: 1371321 - 1372730 (+)
Type: TC
Location: 1371321 - 1372730 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira pectinoschiza_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B36_contig_110_1216 | vegetarian > omnivore | 1.04542 | 0.01253 |
| B36_contig_110_1216 | vegetarian > vegan | 1.97797 | 0.00110 |
| B36_contig_110_1217 | vegetarian > vegan | 1.74120 | 0.00110 |
| B36_contig_110_1219 | vegetarian > vegan | 1.10814 | 0.00110 |