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Genome Details

Selected Rep_genome_ID: B127.bin_4
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Coprobacteraceae
→
Genus
Coprobacter
→
Species
Coprobacter secundus
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
B127.bin_4 3,950,127 99.5% 0% China(Inner Mongolia) Asia IMGG
CGMR012079 3,610,778 94.34% 0.75% China Asia CGMR
Rep_431 3,272,367 92.1441% 0% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
B127.bin_4_CGC57 CGCFAM_00001 Yes 5 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
B127.bin_4_CGC60 CGCFAM_00001 Yes 5 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
B127.bin_4_CGC55 CGCFAM_00006 Yes 9 6
B127.bin_4_CGC54 CGCFAM_00061 Yes 5 2
B127.bin_4_CGC62 CGCFAM_00069 Yes 4 1
B127.bin_4_CGC43 CGCFAM_00095 Yes 8 3
B127.bin_4_CGC11 CGCFAM_00110 Yes 17 7 pectin/host glycan
B127.bin_4_CGC2 CGCFAM_00147 Yes 3 1
B127.bin_4_CGC36 CGCFAM_00254 Yes 4 1
B127.bin_4_CGC23 CGCFAM_00332 Yes 14 7
B127.bin_4_CGC39 CGCFAM_00349 Yes 10 7
B127.bin_4_CGC35 CGCFAM_00512 Yes 9 6
B127.bin_4_CGC33 CGCFAM_00588 Yes 6 2
B127.bin_4_CGC63 CGCFAM_00777 Yes 3 1
B127.bin_4_CGC3 CGCFAM_00983 Yes 5 3
B127.bin_4_CGC48 CGCFAM_01396 Yes 15 3
B127.bin_4_CGC1 CGCFAM_01646 Yes 9 4
B127.bin_4_CGC27 CGCFAM_01687 Yes 3 1
B127.bin_4_CGC20 CGCFAM_02033 Yes 3 1
B127.bin_4_CGC14 CGCFAM_02066 Yes 3 1
B127.bin_4_CGC42 CGCFAM_02480 Yes 7 1
B127.bin_4_CGC9 CGCFAM_02993 Yes 3 1
B127.bin_4_CGC49 CGCFAM_03412 Yes 9 5
B127.bin_4_CGC21 CGCFAM_04152 Yes 8 1
B127.bin_4_CGC47 CGCFAM_07299 Yes 6 2
Top CAZyme Families