Cluster: B127.bin_4_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: B127.bin_4
- CGC Family ID: CGCFAM_00588
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B127_contig_98 | B127_contig_98_161 | 211784 | 213589 | - | 4.C.1.1.14 |
| pfam | B127_contig_98 | B127_contig_98_162 | 213759 | 214658 | - | WYL |
| peptidase | B127_contig_98 | B127_contig_98_163 | 214792 | 215856 | + | M20.UPA |
| CAZyme | B127_contig_98 | B127_contig_98_164 | 215915 | 216856 | - | GT2 |
| NULL(UNKNOWN) | B127_contig_98 | B127_contig_98_165 | 216861 | 218153 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B127_contig_98 | B127_contig_98_166 | 218195 | 219295 | - | GT4 |
Gene ID: B127_contig_98_161
Type: TC
Location: 211784 - 213589 (-)
Type: TC
Location: 211784 - 213589 (-)
Gene ID: B127_contig_98_162
Type: pfam
Location: 213759 - 214658 (-)
Type: pfam
Location: 213759 - 214658 (-)
Gene ID: B127_contig_98_163
Type: peptidase
Location: 214792 - 215856 (+)
Type: peptidase
Location: 214792 - 215856 (+)
Gene ID: B127_contig_98_164
Type: CAZyme
Location: 215915 - 216856 (-)
Type: CAZyme
Location: 215915 - 216856 (-)
Gene ID: B127_contig_98_165
Type:
Location: 216861 - 218153 (-)
Type:
Location: 216861 - 218153 (-)
Gene ID: B127_contig_98_166
Type: CAZyme
Location: 218195 - 219295 (-)
Type: CAZyme
Location: 218195 - 219295 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter secundus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.