Cluster: B127.bin_4_CGC55
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 6
- Substrate:
- Genome ID: B127.bin_4
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B127_contig_2058 | B127_contig_2058_207 | 265685 | 266605 | + | GT2 |
| CAZyme | B127_contig_2058 | B127_contig_2058_208 | 266610 | 267518 | + | GT2 |
| CAZyme | B127_contig_2058 | B127_contig_2058_209 | 267552 | 268643 | + | GT4 |
| pfam | B127_contig_2058 | B127_contig_2058_210 | 268654 | 269754 | + | EpsG |
| CAZyme | B127_contig_2058 | B127_contig_2058_211 | 269769 | 270602 | + | GT2 |
| CAZyme | B127_contig_2058 | B127_contig_2058_212 | 270602 | 271771 | + | GT4 |
| pfam | B127_contig_2058 | B127_contig_2058_213 | 271752 | 272336 | + | Hexapep | Hexapep_2 |
| CAZyme | B127_contig_2058 | B127_contig_2058_214 | 272336 | 273172 | + | CE4 |
| TC | B127_contig_2058 | B127_contig_2058_215 | 273206 | 273814 | + | 9.B.18.1.3 |
Gene ID: B127_contig_2058_207
Type: CAZyme
Location: 265685 - 266605 (+)
Type: CAZyme
Location: 265685 - 266605 (+)
Gene ID: B127_contig_2058_208
Type: CAZyme
Location: 266610 - 267518 (+)
Type: CAZyme
Location: 266610 - 267518 (+)
Gene ID: B127_contig_2058_209
Type: CAZyme
Location: 267552 - 268643 (+)
Type: CAZyme
Location: 267552 - 268643 (+)
Gene ID: B127_contig_2058_210
Type: pfam
Location: 268654 - 269754 (+)
Type: pfam
Location: 268654 - 269754 (+)
Gene ID: B127_contig_2058_211
Type: CAZyme
Location: 269769 - 270602 (+)
Type: CAZyme
Location: 269769 - 270602 (+)
Gene ID: B127_contig_2058_212
Type: CAZyme
Location: 270602 - 271771 (+)
Type: CAZyme
Location: 270602 - 271771 (+)
Gene ID: B127_contig_2058_213
Type: pfam
Location: 271752 - 272336 (+)
Type: pfam
Location: 271752 - 272336 (+)
Gene ID: B127_contig_2058_214
Type: CAZyme
Location: 272336 - 273172 (+)
Type: CAZyme
Location: 272336 - 273172 (+)
Gene ID: B127_contig_2058_215
Type: TC
Location: 273206 - 273814 (+)
Type: TC
Location: 273206 - 273814 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter secundus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.