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Cluster: B127.bin_4_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B127_contig_1816 B127_contig_1816_189 238838 239962 + 1.I.1.1.3
NULL(UNKNOWN) B127_contig_1816 B127_contig_1816_190 239981 240187 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) B127_contig_1816 B127_contig_1816_191 240545 240697 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme B127_contig_1816 B127_contig_1816_192 241007 241975 + CBM50
NULL(UNKNOWN) B127_contig_1816 B127_contig_1816_193 242063 242185 + NULL(UNKNOWN)
[View Structural Homologs]
pfam B127_contig_1816 B127_contig_1816_194 242242 245460 + MGS | ATP-grasp | ATP-grasp | CPSase_L_D2 | CPSase_L_D2 | CPSase_L_D3 | Dala_Dala_lig_C | Dala_Dala_lig_C
TC B127_contig_1816 B127_contig_1816_195 245709 247913 + 3.A.10.1.10
Gene ID: B127_contig_1816_189
Type: TC
Location: 238838 - 239962 (+)
Gene ID: B127_contig_1816_190
Type:
Location: 239981 - 240187 (+)
Gene ID: B127_contig_1816_191
Type:
Location: 240545 - 240697 (-)
Gene ID: B127_contig_1816_192
Type: CAZyme
Location: 241007 - 241975 (+)
Gene ID: B127_contig_1816_193
Type:
Location: 242063 - 242185 (+)
Gene ID: B127_contig_1816_194
Type: pfam
Location: 242242 - 245460 (+)
Gene ID: B127_contig_1816_195
Type: TC
Location: 245709 - 247913 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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