Cluster: B127.bin_4_CGC48
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: B127.bin_4
- CGC Family ID: CGCFAM_01396
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B127_contig_2058 | B127_contig_2058_45 | 39194 | 40771 | + | 3.A.2.1.3 |
| pfam | B127_contig_2058 | B127_contig_2058_46 | 40778 | 41653 | + | ATP-synt |
| STP | B127_contig_2058 | B127_contig_2058_47 | 41770 | 42237 | + | Fer4 | Fer4 |
| TC | B127_contig_2058 | B127_contig_2058_48 | 42242 | 42754 | + | 3.D.9.1.1 |
| TC | B127_contig_2058 | B127_contig_2058_49 | 42760 | 43071 | + | 3.D.1.2.1 |
| TC | B127_contig_2058 | B127_contig_2058_50 | 43094 | 44980 | + | 3.D.9.1.1 |
| TC | B127_contig_2058 | B127_contig_2058_51 | 45017 | 46504 | + | 3.D.1.5.1 |
| TC | B127_contig_2058 | B127_contig_2058_52 | 46515 | 47945 | + | 3.D.1.2.1 |
| pfam | B127_contig_2058 | B127_contig_2058_53 | 48041 | 48556 | + | DUF6125 |
| pfam | B127_contig_2058 | B127_contig_2058_54 | 48893 | 49576 | + | Zn_peptidase_2 |
| CAZyme | B127_contig_2058 | B127_contig_2058_55 | 49889 | 51286 | - | GH57 |
| CAZyme | B127_contig_2058 | B127_contig_2058_56 | 51320 | 52585 | - | GT4 |
| CAZyme | B127_contig_2058 | B127_contig_2058_57 | 52598 | 54541 | - | GH133 |
| TC | B127_contig_2058 | B127_contig_2058_58 | 54662 | 55474 | + | 9.B.104.3.2 |
| TC | B127_contig_2058 | B127_contig_2058_59 | 55513 | 56109 | - | 2.A.95.1.4 |
Gene ID: B127_contig_2058_45
Type: TC
Location: 39194 - 40771 (+)
Type: TC
Location: 39194 - 40771 (+)
Gene ID: B127_contig_2058_46
Type: pfam
Location: 40778 - 41653 (+)
Type: pfam
Location: 40778 - 41653 (+)
Gene ID: B127_contig_2058_47
Type: STP
Location: 41770 - 42237 (+)
Type: STP
Location: 41770 - 42237 (+)
Gene ID: B127_contig_2058_48
Type: TC
Location: 42242 - 42754 (+)
Type: TC
Location: 42242 - 42754 (+)
Gene ID: B127_contig_2058_49
Type: TC
Location: 42760 - 43071 (+)
Type: TC
Location: 42760 - 43071 (+)
Gene ID: B127_contig_2058_50
Type: TC
Location: 43094 - 44980 (+)
Type: TC
Location: 43094 - 44980 (+)
Gene ID: B127_contig_2058_51
Type: TC
Location: 45017 - 46504 (+)
Type: TC
Location: 45017 - 46504 (+)
Gene ID: B127_contig_2058_52
Type: TC
Location: 46515 - 47945 (+)
Type: TC
Location: 46515 - 47945 (+)
Gene ID: B127_contig_2058_53
Type: pfam
Location: 48041 - 48556 (+)
Type: pfam
Location: 48041 - 48556 (+)
Gene ID: B127_contig_2058_54
Type: pfam
Location: 48893 - 49576 (+)
Type: pfam
Location: 48893 - 49576 (+)
Gene ID: B127_contig_2058_55
Type: CAZyme
Location: 49889 - 51286 (-)
Type: CAZyme
Location: 49889 - 51286 (-)
Gene ID: B127_contig_2058_56
Type: CAZyme
Location: 51320 - 52585 (-)
Type: CAZyme
Location: 51320 - 52585 (-)
Gene ID: B127_contig_2058_57
Type: CAZyme
Location: 52598 - 54541 (-)
Type: CAZyme
Location: 52598 - 54541 (-)
Gene ID: B127_contig_2058_58
Type: TC
Location: 54662 - 55474 (+)
Type: TC
Location: 54662 - 55474 (+)
Gene ID: B127_contig_2058_59
Type: TC
Location: 55513 - 56109 (-)
Type: TC
Location: 55513 - 56109 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter secundus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.