Cluster: B127.bin_4_CGC39
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 7
- Substrate:
- Genome ID: B127.bin_4
- CGC Family ID: CGCFAM_00349
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B127_contig_98 | B127_contig_98_376 | 480609 | 481874 | + | GT4 |
| CAZyme | B127_contig_98 | B127_contig_98_377 | 481980 | 483155 | + | GT4 |
| CAZyme | B127_contig_98 | B127_contig_98_378 | 483170 | 484138 | + | GT2 |
| CAZyme | B127_contig_98 | B127_contig_98_379 | 484260 | 485129 | + | GT2 |
| CAZyme | B127_contig_98 | B127_contig_98_380 | 485072 | 486067 | + | GT2 |
| CAZyme | B127_contig_98 | B127_contig_98_381 | 486097 | 487119 | - | GT2 |
| CAZyme | B127_contig_98 | B127_contig_98_382 | 487119 | 487934 | - | GT2 |
| pfam | B127_contig_98 | B127_contig_98_383 | 488203 | 489087 | - | dsrm | Ribonuclease_3 | Ribonucleas_3_3 |
| pfam | B127_contig_98 | B127_contig_98_384 | 489101 | 490363 | - | ketoacyl-synt | Ketoacyl-synt_C |
| TC | B127_contig_98 | B127_contig_98_385 | 490385 | 490621 | - | 3.D.1.6.3 |
Gene ID: B127_contig_98_376
Type: CAZyme
Location: 480609 - 481874 (+)
Type: CAZyme
Location: 480609 - 481874 (+)
Gene ID: B127_contig_98_377
Type: CAZyme
Location: 481980 - 483155 (+)
Type: CAZyme
Location: 481980 - 483155 (+)
Gene ID: B127_contig_98_378
Type: CAZyme
Location: 483170 - 484138 (+)
Type: CAZyme
Location: 483170 - 484138 (+)
Gene ID: B127_contig_98_379
Type: CAZyme
Location: 484260 - 485129 (+)
Type: CAZyme
Location: 484260 - 485129 (+)
Gene ID: B127_contig_98_380
Type: CAZyme
Location: 485072 - 486067 (+)
Type: CAZyme
Location: 485072 - 486067 (+)
Gene ID: B127_contig_98_381
Type: CAZyme
Location: 486097 - 487119 (-)
Type: CAZyme
Location: 486097 - 487119 (-)
Gene ID: B127_contig_98_382
Type: CAZyme
Location: 487119 - 487934 (-)
Type: CAZyme
Location: 487119 - 487934 (-)
Gene ID: B127_contig_98_383
Type: pfam
Location: 488203 - 489087 (-)
Type: pfam
Location: 488203 - 489087 (-)
Gene ID: B127_contig_98_384
Type: pfam
Location: 489101 - 490363 (-)
Type: pfam
Location: 489101 - 490363 (-)
Gene ID: B127_contig_98_385
Type: TC
Location: 490385 - 490621 (-)
Type: TC
Location: 490385 - 490621 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter secundus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.