Genome Details
Selected Rep_genome_ID: A41.CMAG_2
Total Genomes Found: 7
Total Genomes Found: 7
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola coprocola
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A41.CMAG_2 | 3,891,527 | 98.88% | 0.07% | China(Inner Mongolia) | Asia | IMGG |
| Rep_520 | 3,767,473 | 93.5821% | 0.124378% | NA | NA | WIS |
| SPMP10_bin.73 | 3,573,981 | 97.17% | 0.37% | Singapore | Asia | SPMP |
| SPMP46_bin.29 | 3,208,202 | 92.17% | 1.31% | Singapore | Asia | SPMP |
| SPMP48_bin.21 | 3,658,994 | 96.97% | 0.6% | Singapore | Asia | SPMP |
| SPMP50_bin.68 | 3,575,993 | 96.92% | 3.73% | Singapore | Asia | SPMP |
| SPMP54_bin.55 | 3,606,556 | 96.75% | 1.89% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| A41.CMAG_2_CGC25 | CGCFAM_00743 | Yes | 5 | 1 | |
| A41.CMAG_2_CGC28 | CGCFAM_00754 | Yes | 8 | 5 | |
| A41.CMAG_2_CGC9 | CGCFAM_00981 | Yes | 3 | 2 | |
| A41.CMAG_2_CGC11 | CGCFAM_01306 | Yes | 7 | 2 | |
| A41.CMAG_2_CGC18 | CGCFAM_01307 | Yes | 8 | 2 | |
| A41.CMAG_2_CGC26 | CGCFAM_01889 | Yes | 10 | 2 | |
| A41.CMAG_2_CGC34 | CGCFAM_01914 | Yes | 5 | 1 | |
| A41.CMAG_2_CGC21 | CGCFAM_03096 | Yes | 3 | 1 | |
| A41.CMAG_2_CGC27 | CGCFAM_03097 | Yes | 3 | 1 | |
| A41.CMAG_2_CGC24 | CGCFAM_04346 | Yes | 3 | 1 | |
| A41.CMAG_2_CGC20 | CGCFAM_04397 | Yes | 9 | 3 | |
| A41.CMAG_2_CGC3 | CGCFAM_04398 | Yes | 16 | 6 | |
| A41.CMAG_2_CGC33 | CGCFAM_04399 | Yes | 6 | 1 | |
| A41.CMAG_2_CGC38 | CGCFAM_04400 | Yes | 16 | 7 | |
| A41.CMAG_2_CGC49 | CGCFAM_04401 | Yes | 19 | 7 | |
| A41.CMAG_2_CGC10 | CGCFAM_06739 | Yes | 14 | 2 |
Top CAZyme Families