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Cluster: A41.CMAG_2_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A41_contig_166 A41_contig_166_3156 3632779 3634377 - 2.A.81.1.2
pfam A41_contig_166 A41_contig_166_3157 3634549 3635829 + TonB_C
CAZyme A41_contig_166 A41_contig_166_3158 3636032 3637756 - CE12 | CE8
CAZyme A41_contig_166 A41_contig_166_3159 3637765 3639963 - CE19 | PL10_1
CAZyme A41_contig_166 A41_contig_166_3160 3640171 3641787 - PL10_2
STP A41_contig_166 A41_contig_166_3161 3641945 3642403 + AraC_binding
CAZyme A41_contig_166 A41_contig_166_3162 3642619 3644097 - PL1_2
CAZyme A41_contig_166 A41_contig_166_3163 3644108 3645658 - PL1_2
pfam A41_contig_166 A41_contig_166_3164 3645779 3647419 - DUF5123
pfam A41_contig_166 A41_contig_166_3165 3647447 3649414 - SusD_RagB | SusD-like_3
TC A41_contig_166 A41_contig_166_3166 3649423 3652671 - 1.B.14.6.1
CAZyme A41_contig_166 A41_contig_166_3167 3652777 3654876 - CE8 | GH105
TC A41_contig_166 A41_contig_166_3168 3655138 3656523 + 4.A.5.1.2
pfam A41_contig_166 A41_contig_166_3169 3656566 3657489 + KduI
TC A41_contig_166 A41_contig_166_3170 3657693 3659171 + 2.A.1.14.25
NULL(UNKNOWN) A41_contig_166 A41_contig_166_3171 3660060 3660980 - NULL(UNKNOWN)
[View Structural Homologs]
TC A41_contig_166 A41_contig_166_3172 3661242 3664496 + 1.B.14.6.1
pfam A41_contig_166 A41_contig_166_3173 3664512 3666602 + SusD_RagB | SusD-like_3
CAZyme A41_contig_166 A41_contig_166_3174 3666825 3668138 - CE7
Gene ID: A41_contig_166_3156
Type: TC
Location: 3632779 - 3634377 (-)
Gene ID: A41_contig_166_3157
Type: pfam
Location: 3634549 - 3635829 (+)
Gene ID: A41_contig_166_3158
Type: CAZyme
Location: 3636032 - 3637756 (-)
Gene ID: A41_contig_166_3159
Type: CAZyme
Location: 3637765 - 3639963 (-)
Gene ID: A41_contig_166_3160
Type: CAZyme
Location: 3640171 - 3641787 (-)
Gene ID: A41_contig_166_3161
Type: STP
Location: 3641945 - 3642403 (+)
Gene ID: A41_contig_166_3162
Type: CAZyme
Location: 3642619 - 3644097 (-)
Gene ID: A41_contig_166_3163
Type: CAZyme
Location: 3644108 - 3645658 (-)
Gene ID: A41_contig_166_3164
Type: pfam
Location: 3645779 - 3647419 (-)
Gene ID: A41_contig_166_3165
Type: pfam
Location: 3647447 - 3649414 (-)
Gene ID: A41_contig_166_3166
Type: TC
Location: 3649423 - 3652671 (-)
Gene ID: A41_contig_166_3167
Type: CAZyme
Location: 3652777 - 3654876 (-)
Gene ID: A41_contig_166_3168
Type: TC
Location: 3655138 - 3656523 (+)
Gene ID: A41_contig_166_3169
Type: pfam
Location: 3656566 - 3657489 (+)
Gene ID: A41_contig_166_3170
Type: TC
Location: 3657693 - 3659171 (+)
Gene ID: A41_contig_166_3171
Type:
Location: 3660060 - 3660980 (-)
Gene ID: A41_contig_166_3172
Type: TC
Location: 3661242 - 3664496 (+)
Gene ID: A41_contig_166_3173
Type: pfam
Location: 3664512 - 3666602 (+)
Gene ID: A41_contig_166_3174
Type: CAZyme
Location: 3666825 - 3668138 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A41_contig_166_3157 vegetarian > vegan 1.13603 0.01450
A41_contig_166_3161 vegetarian > omnivore 1.31505 0.03780
A41_contig_166_3161 vegetarian > vegan 1.31590 0.01450
A41_contig_166_3162 vegetarian > omnivore 1.17675 0.03780
A41_contig_166_3162 vegetarian > vegan 1.45050 0.01450
A41_contig_166_3163 vegetarian > omnivore 1.34803 0.03451
A41_contig_166_3163 vegetarian > vegan 1.43403 0.01450
A41_contig_166_3164 vegetarian > omnivore 1.34631 0.03780
A41_contig_166_3164 vegetarian > vegan 1.26719 0.01450
A41_contig_166_3165 vegetarian > omnivore 1.08638 0.03780
A41_contig_166_3174 vegetarian > vegan 1.21043 0.01450

🧭 Explore Read Mapping of CGC

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