PROTEIN: A41_contig_166_3171
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Protein File & Metadata
Source:
A41_contig_166_3171.pdb
Genome ID:
Protein ID:
A41_contig_166_3171
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Protein Sequence
MQYQSECMSA LKSVANIHKP FEKAFMDTMK LFMAIPDRIN FLQLGRYGCF SEQTYRNLFE 60 HETFDWFAFN GSVISKHLTG KRKAIAIDPS YIPKSGKKTP WIGYFWSGCA GEYKRGLEIM 120 GIGVIDIDNH ECMTLGSIQT PDCKTLDNMD KNLVDWYSCY LISRKDKLQS ISKTVVADAF 180 FSKETFVTPM CENGFHVISR FRNDVVLYYP TLEKKTGKRG HPKWFDGRID FANLDLTRCK 240 EYEVNKGKLY GLRVYAKAFK RYVSLAVWYP MDGRTDKWQL YFSTDDSMDG REVLDYYRTR 300 FQLEFL 306
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0ER14-F1-model_v4 | 29 | 306 | 1 | 308 | 0.6524 |
0.7858 |
| AF-A0A0H3GPI0-F1-model_v4 | 1 | 306 | 17 | 328 | 0.6135 |
0.7249 |
| AF-Q32GW6-F1-model_v4 | 1 | 306 | 12 | 322 | 0.5946 |
0.6731 |
| AF-Q32CZ3-F1-model_v4 | 1 | 306 | 26 | 322 | 0.583 |
0.6939 |
| AF-A0A077ZN93-F1-model_v4 | 1 | 306 | 83 | 438 | 0.5787 |
0.7433 |
| AF-P03835-F1-model_v4 | 4 | 306 | 20 | 316 | 0.5572 |
0.6887 |
| AF-Q32J58-F1-model_v4 | 1 | 306 | 25 | 322 | 0.5548 |
0.6877 |
| AF-Q32A43-F1-model_v4 | 1 | 306 | 25 | 322 | 0.5545 |
0.6873 |
| AF-Q32JF1-F1-model_v4 | 4 | 306 | 26 | 322 | 0.5545 |
0.6887 |
| AF-Q32CS7-F1-model_v4 | 1 | 306 | 25 | 322 | 0.5542 |
0.6869 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1muh-assembly1.cif.gz_A-2 | 1 | 306 | 3 | 324 | 0.6262 |
0.7623 |
| 1mm8-assembly1.cif.gz_A-2 | 1 | 306 | 3 | 324 | 0.6235 |
0.7593 |
| 3ecp-assembly1.cif.gz_A-2 | 1 | 306 | 5 | 326 | 0.6208 |
0.7579 |
| 4dm0-assembly1.cif.gz_A-2 | 1 | 306 | 5 | 326 | 0.6202 |
0.7582 |
| 1mus-assembly1.cif.gz_A-2 | 1 | 306 | 4 | 325 | 0.6196 |
0.7564 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q00461-F1-model_v4 | 1 | 306 | 9 | 308 | 0.646 |
0.748 |
| AF-Q46731-F1-model_v4 | 1 | 306 | 7 | 328 | 0.6128 |
0.7586 |
| AF-Q45620-F1-model_v4 | 1 | 306 | 1 | 286 | 0.5887 |
0.7094 |
| AF-P03835-F1-model_v4 | 4 | 306 | 20 | 316 | 0.5572 |
0.6887 |
| AF-P12250-F1-model_v4 | 1 | 306 | 6 | 351 | 0.5512 |
0.6852 |
| AF-Q05501-F1-model_v4 | 1 | 306 | 6 | 351 | 0.5493 |
0.683 |
| AF-P12249-F1-model_v4 | 1 | 306 | 6 | 351 | 0.5489 |
0.6825 |
| AF-Q02403-F1-model_v4 | 1 | 306 | 6 | 351 | 0.5485 |
0.6818 |
| AF-P12248-F1-model_v4 | 2 | 306 | 5 | 351 | 0.5481 |
0.6826 |
| AF-Q02404-F1-model_v4 | 1 | 306 | 5 | 351 | 0.5472 |
0.6796 |