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Cluster: A41.CMAG_2_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A41_contig_166 A41_contig_166_435 565769 568231 + 3.A.11.3.1
pfam A41_contig_166 A41_contig_166_436 568243 568959 + PHP
pfam A41_contig_166 A41_contig_166_437 568956 569426 + LMWPc
CAZyme A41_contig_166 A41_contig_166_438 569676 570797 - PL10_1
STP A41_contig_166 A41_contig_166_439 570898 572955 - HD
pfam A41_contig_166 A41_contig_166_440 573040 574557 + tRNA-synt_1c | Anticodon_2
CAZyme A41_contig_166 A41_contig_166_441 574566 575789 + GT30
Gene ID: A41_contig_166_435
Type: TC
Location: 565769 - 568231 (+)
Gene ID: A41_contig_166_436
Type: pfam
Location: 568243 - 568959 (+)
Gene ID: A41_contig_166_437
Type: pfam
Location: 568956 - 569426 (+)
Gene ID: A41_contig_166_438
Type: CAZyme
Location: 569676 - 570797 (-)
Gene ID: A41_contig_166_439
Type: STP
Location: 570898 - 572955 (-)
Gene ID: A41_contig_166_440
Type: pfam
Location: 573040 - 574557 (+)
Gene ID: A41_contig_166_441
Type: CAZyme
Location: 574566 - 575789 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A41_contig_166_437 vegetarian > vegan 1.25154 0.01450

🧭 Explore Read Mapping of CGC

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