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Cluster: A41.CMAG_2_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A41_contig_166 A41_contig_166_93 116233 119319 + 1.B.14.6.1
TC A41_contig_166 A41_contig_166_94 119332 120942 + 8.A.46.1.3
CAZyme A41_contig_166 A41_contig_166_95 120976 122172 + CE1
CAZyme A41_contig_166 A41_contig_166_96 122184 124529 + GH3
NULL(UNKNOWN) A41_contig_166 A41_contig_166_97 125034 125465 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A41_contig_166 A41_contig_166_98 125462 126319 - GH20
pfam A41_contig_166 A41_contig_166_99 126742 128784 + tRNA-synt_1 | tRNA_bind | Anticodon_1 | tRNA-synt_1g | Anticodon_3
TC A41_contig_166 A41_contig_166_100 128892 130346 + 2.A.66.2.23
NULL(UNKNOWN) A41_contig_166 A41_contig_166_101 130343 131263 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) A41_contig_166 A41_contig_166_102 131269 132273 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A41_contig_166 A41_contig_166_103 132299 133189 + GT2
NULL(UNKNOWN) A41_contig_166 A41_contig_166_104 133193 134104 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme A41_contig_166 A41_contig_166_105 134136 135419 + GT4
CAZyme A41_contig_166 A41_contig_166_106 135412 136167 + GT2
peptidase A41_contig_166 A41_contig_166_107 136241 137776 + M48.UNW
TC A41_contig_166 A41_contig_166_108 138043 140538 - 9.B.144.1.4
Gene ID: A41_contig_166_93
Type: TC
Location: 116233 - 119319 (+)
Gene ID: A41_contig_166_94
Type: TC
Location: 119332 - 120942 (+)
Gene ID: A41_contig_166_95
Type: CAZyme
Location: 120976 - 122172 (+)
Gene ID: A41_contig_166_96
Type: CAZyme
Location: 122184 - 124529 (+)
Gene ID: A41_contig_166_97
Type:
Location: 125034 - 125465 (-)
Gene ID: A41_contig_166_98
Type: CAZyme
Location: 125462 - 126319 (-)
Gene ID: A41_contig_166_99
Type: pfam
Location: 126742 - 128784 (+)
Gene ID: A41_contig_166_100
Type: TC
Location: 128892 - 130346 (+)
Gene ID: A41_contig_166_101
Type:
Location: 130343 - 131263 (+)
Gene ID: A41_contig_166_102
Type:
Location: 131269 - 132273 (+)
Gene ID: A41_contig_166_103
Type: CAZyme
Location: 132299 - 133189 (+)
Gene ID: A41_contig_166_104
Type:
Location: 133193 - 134104 (+)
Gene ID: A41_contig_166_105
Type: CAZyme
Location: 134136 - 135419 (+)
Gene ID: A41_contig_166_106
Type: CAZyme
Location: 135412 - 136167 (+)
Gene ID: A41_contig_166_107
Type: peptidase
Location: 136241 - 137776 (+)
Gene ID: A41_contig_166_108
Type: TC
Location: 138043 - 140538 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A41_contig_166_94 vegetarian > omnivore 1.02362 0.03486
A41_contig_166_102 vegetarian > vegan 1.09350 0.01450
A41_contig_166_104 vegetarian > vegan 1.05810 0.01450

🧭 Explore Read Mapping of CGC

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