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Cluster: A41.CMAG_2_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A41_contig_166 A41_contig_166_1424 1681255 1684401 + 1.B.14.6.13
pfam A41_contig_166 A41_contig_166_1425 1684420 1686414 + SusD-like | SusD-like | SusD-like_2 | SusD-like_2
CAZyme A41_contig_166 A41_contig_166_1426 1686592 1687938 + GH29
CAZyme A41_contig_166 A41_contig_166_1427 1687950 1689020 + CBM9
pfam A41_contig_166 A41_contig_166_1428 1689039 1690334 + N-glycanase_N | N-glycanase_C
TC A41_contig_166 A41_contig_166_1429 1690393 1691136 - 9.B.158.1.1
TC A41_contig_166 A41_contig_166_1430 1691192 1691869 - 2.A.115.2.8
pfam A41_contig_166 A41_contig_166_1431 1691998 1692300 + Acetyltransf_CG
pfam A41_contig_166 A41_contig_166_1432 1692203 1692754 - DUF2007
TC A41_contig_166 A41_contig_166_1433 1692767 1694893 - 2.A.36.7.6
Gene ID: A41_contig_166_1424
Type: TC
Location: 1681255 - 1684401 (+)
Gene ID: A41_contig_166_1425
Type: pfam
Location: 1684420 - 1686414 (+)
Gene ID: A41_contig_166_1426
Type: CAZyme
Location: 1686592 - 1687938 (+)
Gene ID: A41_contig_166_1427
Type: CAZyme
Location: 1687950 - 1689020 (+)
Gene ID: A41_contig_166_1428
Type: pfam
Location: 1689039 - 1690334 (+)
Gene ID: A41_contig_166_1429
Type: TC
Location: 1690393 - 1691136 (-)
Gene ID: A41_contig_166_1430
Type: TC
Location: 1691192 - 1691869 (-)
Gene ID: A41_contig_166_1431
Type: pfam
Location: 1691998 - 1692300 (+)
Gene ID: A41_contig_166_1432
Type: pfam
Location: 1692203 - 1692754 (-)
Gene ID: A41_contig_166_1433
Type: TC
Location: 1692767 - 1694893 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A41_contig_166_1429 vegetarian > omnivore 1.01146 0.03780
A41_contig_166_1431 vegetarian > omnivore 1.38018 0.03780
A41_contig_166_1432 vegetarian > omnivore 1.11285 0.03780

🧭 Explore Read Mapping of CGC

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