Genome Details
Selected Rep_genome_ID: A171.bin_4
Total Genomes Found: 7
Total Genomes Found: 7
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Weissella
Species
Weissella confusa
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A171.bin_4 | 2,473,322 | 99.08% | 0% | China(Inner Mongolia) | Asia | IMGG |
| AG209_bin.18 | 1,944,062 | 97.09% | 0% | NA | Africa | H3AfricaPhase2 |
| CGMR051648 | 2,117,278 | 98.16% | 0% | China | Asia | CGMR |
| CGMR071372 | 2,064,624 | 97.91% | 3.75% | China | Asia | CGMR |
| HRGMv2_2510 | 2,191,672 | 99.07% | 0% | South Korea | Asia | HRGM |
| SPMP76_bin.101 | 1,884,633 | 91.63% | 0.91% | Singapore | Asia | SPMP |
| SPMP97_bin.10 | 2,129,994 | 93.06% | 1.38% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| A171.bin_4_CGC13 | CGCFAM_00003 | Yes | 7 | 3 | |
| A171.bin_4_CGC23 | CGCFAM_00013 | Yes | 3 | 1 | |
| A171.bin_4_CGC15 | CGCFAM_00280 | Yes | 7 | 4 | |
| A171.bin_4_CGC7 | CGCFAM_00508 | Yes | 3 | 1 | |
| A171.bin_4_CGC16 | CGCFAM_00938 | Yes | 4 | 1 | galactan |
| A171.bin_4_CGC10 | CGCFAM_00971 | Yes | 8 | 2 | |
| A171.bin_4_CGC25 | CGCFAM_01292 | Yes | 4 | 1 | |
| A171.bin_4_CGC3 | CGCFAM_01822 | Yes | 6 | 1 | |
| A171.bin_4_CGC8 | CGCFAM_01861 | Yes | 3 | 2 | |
| A171.bin_4_CGC24 | CGCFAM_03066 | Yes | 6 | 1 | |
| A171.bin_4_CGC20 | CGCFAM_04338 | Yes | 8 | 2 | |
| A171.bin_4_CGC21 | CGCFAM_04339 | Yes | 10 | 1 | |
| A171.bin_4_CGC26 | CGCFAM_04340 | Yes | 5 | 2 | |
| A171.bin_4_CGC29 | CGCFAM_04341 | Yes | 3 | 1 | |
| A171.bin_4_CGC5 | CGCFAM_04342 | Yes | 8 | 2 | |
| A171.bin_4_CGC1 | CGCFAM_06684 | Yes | 8 | 2 | |
| A171.bin_4_CGC14 | CGCFAM_06685 | Yes | 4 | 2 | |
| A171.bin_4_CGC2 | CGCFAM_06686 | Yes | 8 | 2 | |
| A171.bin_4_CGC22 | CGCFAM_06687 | Yes | 10 | 1 | |
| A171.bin_4_CGC4 | CGCFAM_06688 | Yes | 8 | 2 | |
| A171.bin_4_CGC9 | CGCFAM_06690 | Yes | 11 | 2 |
Top CAZyme Families