dbCAN Logo

Cluster: A171.bin_4_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A171_contig_113 A171_contig_113_99 109170 111287 - GH31_3
TC A171_contig_113 A171_contig_113_100 111330 112748 - 2.A.2.3.3
CAZyme A171_contig_113 A171_contig_113_101 112994 114160 - GH8
STP A171_contig_113 A171_contig_113_102 114304 115551 - HATPase_c | HisKA
TF A171_contig_113 A171_contig_113_103 115556 116254 - Trans_reg_C
TC A171_contig_113 A171_contig_113_104 116486 117439 - 2.A.109.1.2
pfam A171_contig_113 A171_contig_113_105 117831 120008 - MucBP
TC A171_contig_113 A171_contig_113_106 120143 121594 - 4.C.1.1.6
Gene ID: A171_contig_113_99
Type: CAZyme
Location: 109170 - 111287 (-)
Gene ID: A171_contig_113_100
Type: TC
Location: 111330 - 112748 (-)
Gene ID: A171_contig_113_101
Type: CAZyme
Location: 112994 - 114160 (-)
Gene ID: A171_contig_113_102
Type: STP
Location: 114304 - 115551 (-)
Gene ID: A171_contig_113_103
Type: TF
Location: 115556 - 116254 (-)
Gene ID: A171_contig_113_104
Type: TC
Location: 116486 - 117439 (-)
Gene ID: A171_contig_113_105
Type: pfam
Location: 117831 - 120008 (-)
Gene ID: A171_contig_113_106
Type: TC
Location: 120143 - 121594 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Lactobacillaceae
→
Genus
Weissella
→
Species
Weissella confusa

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List