Cluster: A171.bin_4_CGC20
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: A171.bin_4
- CGC Family ID: CGCFAM_04338
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A171_contig_113 | A171_contig_113_1651 | 1752907 | 1753626 | + | 1.A.8.2.7 |
| peptidase | A171_contig_113 | A171_contig_113_1652 | 1753693 | 1755501 | - | M03.007 |
| pfam | A171_contig_113 | A171_contig_113_1653 | 1755582 | 1756592 | - | CoiA_nuc |
| TC | A171_contig_113 | A171_contig_113_1654 | 1756710 | 1758071 | - | 4.A.3.2.2 |
| CAZyme | A171_contig_113 | A171_contig_113_1655 | 1758146 | 1759597 | - | GH1 |
| TC | A171_contig_113 | A171_contig_113_1656 | 1759597 | 1759923 | - | 4.A.3.2.4 |
| TC | A171_contig_113 | A171_contig_113_1657 | 1760007 | 1760324 | - | 4.A.3.2.4 |
| CAZyme | A171_contig_113 | A171_contig_113_1658 | 1760373 | 1761830 | - | GH1 |
Gene ID: A171_contig_113_1651
Type: TC
Location: 1752907 - 1753626 (+)
Type: TC
Location: 1752907 - 1753626 (+)
Gene ID: A171_contig_113_1652
Type: peptidase
Location: 1753693 - 1755501 (-)
Type: peptidase
Location: 1753693 - 1755501 (-)
Gene ID: A171_contig_113_1653
Type: pfam
Location: 1755582 - 1756592 (-)
Type: pfam
Location: 1755582 - 1756592 (-)
Gene ID: A171_contig_113_1654
Type: TC
Location: 1756710 - 1758071 (-)
Type: TC
Location: 1756710 - 1758071 (-)
Gene ID: A171_contig_113_1655
Type: CAZyme
Location: 1758146 - 1759597 (-)
Type: CAZyme
Location: 1758146 - 1759597 (-)
Gene ID: A171_contig_113_1656
Type: TC
Location: 1759597 - 1759923 (-)
Type: TC
Location: 1759597 - 1759923 (-)
Gene ID: A171_contig_113_1657
Type: TC
Location: 1760007 - 1760324 (-)
Type: TC
Location: 1760007 - 1760324 (-)
Gene ID: A171_contig_113_1658
Type: CAZyme
Location: 1760373 - 1761830 (-)
Type: CAZyme
Location: 1760373 - 1761830 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Weissella
Species
Weissella confusa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.