Cluster: A171.bin_4_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A171.bin_4
- CGC Family ID: CGCFAM_01292
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A171_contig_113 | A171_contig_113_1859 | 1973501 | 1975042 | - | 2.A.1.3.61 |
| TC | A171_contig_113 | A171_contig_113_1860 | 1975322 | 1977280 | - | 3.A.1.121.4 |
| NULL(UNKNOWN) | A171_contig_113 | A171_contig_113_1861 | 1977425 | 1978126 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A171_contig_113 | A171_contig_113_1862 | 1978142 | 1980073 | - | GT4 |
Gene ID: A171_contig_113_1859
Type: TC
Location: 1973501 - 1975042 (-)
Type: TC
Location: 1973501 - 1975042 (-)
Gene ID: A171_contig_113_1860
Type: TC
Location: 1975322 - 1977280 (-)
Type: TC
Location: 1975322 - 1977280 (-)
Gene ID: A171_contig_113_1861
Type:
Location: 1977425 - 1978126 (-)
Type:
Location: 1977425 - 1978126 (-)
Gene ID: A171_contig_113_1862
Type: CAZyme
Location: 1978142 - 1980073 (-)
Type: CAZyme
Location: 1978142 - 1980073 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Weissella
Species
Weissella confusa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.