Cluster: A171.bin_4_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: A171.bin_4
- CGC Family ID: CGCFAM_04340
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A171_contig_113 | A171_contig_113_1981 | 2067952 | 2068755 | - | CBM50 |
| CAZyme | A171_contig_113 | A171_contig_113_1982 | 2068912 | 2069757 | - | CBM50 |
| pfam | A171_contig_113 | A171_contig_113_1983 | 2070182 | 2071159 | - | ROK |
| pfam | A171_contig_113 | A171_contig_113_1984 | 2071281 | 2071490 | - | YqgQ-like |
| TC | A171_contig_113 | A171_contig_113_1985 | 2071500 | 2072201 | - | 9.B.104.1.3 |
Gene ID: A171_contig_113_1981
Type: CAZyme
Location: 2067952 - 2068755 (-)
Type: CAZyme
Location: 2067952 - 2068755 (-)
Gene ID: A171_contig_113_1982
Type: CAZyme
Location: 2068912 - 2069757 (-)
Type: CAZyme
Location: 2068912 - 2069757 (-)
Gene ID: A171_contig_113_1983
Type: pfam
Location: 2070182 - 2071159 (-)
Type: pfam
Location: 2070182 - 2071159 (-)
Gene ID: A171_contig_113_1984
Type: pfam
Location: 2071281 - 2071490 (-)
Type: pfam
Location: 2071281 - 2071490 (-)
Gene ID: A171_contig_113_1985
Type: TC
Location: 2071500 - 2072201 (-)
Type: TC
Location: 2071500 - 2072201 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Weissella
Species
Weissella confusa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.